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- Transcript 'KH2012:KH.C11.268.v1...' >
- Transcript 'KH2012:KH.C11.268.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.268.v1.A.nonSL37-1
Possible name(s)
RPS13
Gene model
Location
KhC11 [977,179 / 979,447]
Amino acid sequence
Length: 176
>KH.C11.268.v1.A.nonSL37-1
LDFYGLRIDDFLNLVPIILFTPTSNMGRMHAPGKGLSSSALPYRRSVPTWLKLSSEDVKE
QIYKLAKKGLRPSQIGVILRDSHGVAQVRFVTGNQILRVLKAKGLAPDLPEDIYHLIKKA
VAMRKHLERNRKDTDSKFRLILVESRIHRLGRYYKTKGVLPPNWKYESATASALVA
Nucleotide sequence
Length: 556
>KH2012:KH.C11.268.v1.A.nonSL37-1
ATTAGATTTCTATGGGTTACGGATTGATGATTTCCTGAACCTCGTTCCCATAATTCTTTT
CACGCCAACCAGCAACATGGGTCGTATGCACGCACCTGGAAAGGGTCTTTCTTCATCAGC
ACTTCCATACAGAAGAAGTGTTCCAACATGGTTAAAGCTTAGTTCCGAGGATGTAAAAGA
ACAAATCTACAAACTCGCAAAGAAGGGACTTCGACCTTCCCAGATCGGAGTTATTCTTAG
AGATTCTCATGGTGTTGCTCAGGTACGATTTGTCACTGGCAACCAGATCTTGAGAGTTCT
CAAAGCAAAGGGACTTGCCCCAGATCTTCCTGAAGATATTTACCATCTTATTAAGAAGGC
TGTTGCCATGCGCAAACATTTGGAGAGAAACAGAAAAGACACTGACTCCAAATTCCGTCT
TATTCTCGTCGAAAGTCGTATTCACCGTCTTGGGCGTTACTACAAGACCAAAGGTGTTCT
ACCACCTAACTGGAAATACGAGAGTGCCACCGCTTCTGCTCTTGTAGCGTAAACTGATAT
TAAATCTTGACACAAA
| Pfam |
Ribosomal_S13/S15_N (IPR012606) - T[26-85] 4.3E-32 |
| PANTHER |
Ribosomal_S15P (IPR023029) - T[26-176] 1.3E-81 |
| SMART |
Ribosomal_S13/S15_N (IPR012606) - T[26-85] 4.0E-38 |
| Hamap |
Ribosomal_S15P (IPR023029) - T[28-174] 31.728 |
| SUPERFAMILY |
S15_NS1_RNA-bd (IPR009068) - T[91-167] 1.03E-20 |
| CDD |
Ribosomal_S15 (IPR000589) - T[95-170] 9.12511E-27 |
| SMART |
Ribosomal_S15 (IPR000589) - T[96-174] 2.1E-11 |
| Pfam |
Ribosomal_S15 (IPR000589) - T[100-172] 6.9E-16 |
| ProSitePatterns |
Ribosomal_S15 (IPR000589) - T[123-153] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RS13_HUMAN | 90.066 % | 283 | 1.71E-99 |