- Transcript 'KH2012:KH.C11.268.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.268.v1.A.nonSL6-1
Possible name(s)
RPS13
Gene model
Location
KhC11 [977,222 / 979,447]
Amino acid sequence
Length: 162
>KH.C11.268.v1.A.nonSL6-1
VPIILFTPTSNMGRMHAPGKGLSSSALPYRRSVPTWLKLSSEDVKEQIYKLAKKGLRPSQ
IGVILRDSHGVAQVRFVTGNQILRVLKAKGLAPDLPEDIYHLIKKAVAMRKHLERNRKDT
DSKFRLILVESRIHRLGRYYKTKGVLPPNWKYESATASALVA
Nucleotide sequence
Length: 513
>KH2012:KH.C11.268.v1.A.nonSL6-1
GTTCCCATAATTCTTTTCACGCCAACCAGCAACATGGGTCGTATGCACGCACCTGGAAAG
GGTCTTTCTTCATCAGCACTTCCATACAGAAGAAGTGTTCCAACATGGTTAAAGCTTAGT
TCCGAGGATGTAAAAGAACAAATCTACAAACTCGCAAAGAAGGGACTTCGACCTTCCCAG
ATCGGAGTTATTCTTAGAGATTCTCATGGTGTTGCTCAGGTACGATTTGTCACTGGCAAC
CAGATCTTGAGAGTTCTCAAAGCAAAGGGACTTGCCCCAGATCTTCCTGAAGATATTTAC
CATCTTATTAAGAAGGCTGTTGCCATGCGCAAACATTTGGAGAGAAACAGAAAAGACACT
GACTCCAAATTCCGTCTTATTCTCGTCGAAAGTCGTATTCACCGTCTTGGGCGTTACTAC
AAGACCAAAGGTGTTCTACCACCTAACTGGAAATACGAGAGTGCCACCGCTTCTGCTCTT
GTAGCGTAAACTGATATTAAATCTTGACACAAA
| Pfam |
Ribosomal_S13/S15_N (IPR012606) - T[12-71] 3.6E-32 |
| PANTHER |
Ribosomal_S15P (IPR023029) - T[12-162] 9.3E-82 |
| SMART |
Ribosomal_S13/S15_N (IPR012606) - T[12-71] 4.0E-38 |
| Hamap |
Ribosomal_S15P (IPR023029) - T[14-160] 31.728 |
| SUPERFAMILY |
S15_NS1_RNA-bd (IPR009068) - T[77-153] 8.24E-21 |
| CDD |
Ribosomal_S15 (IPR000589) - T[81-156] 7.74897E-27 |
| SMART |
Ribosomal_S15 (IPR000589) - T[82-160] 2.1E-11 |
| Pfam |
Ribosomal_S15 (IPR000589) - T[86-158] 5.7E-16 |
| ProSitePatterns |
Ribosomal_S15 (IPR000589) - T[109-139] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RS13_HUMAN | 90.066 % | 283 | 5.33E-100 |