- Transcript 'KH2012:KH.C3.87.v8.A...' >
- Transcript 'KH2012:KH.C14.422.v1...' >
- Transcript 'KH2012:KH.C3.87.v1.A...' >
- Transcript 'KH2012:KH.C11.274.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.274.v1.A.ND1-1
Possible name(s)
CSMD1; SELP; SVEP1
Gene model
Location
KhC11 [384,102 / 394,186]
Amino acid sequence
Length: 781
>KH.C11.274.v1.A.ND1-1
RMNSVSILYLVAGLASVAALRCWECNNVGSNEECIQQGKLVQCGTNQDACQIELRHGGWG
YKVMISKRCKQSQACENNFNQNPQSAWEFTQCNLRVPSSVCRCCCKGNECNKGSLTCWTD
NATCVPSHTNPRNGRVSCTNTNEVGSSCSFDCNTGYRLIGSPTSVCQNDETWSNAAPECQ
PILCPPPHVAPPNGNVKCTNNNLLGSRCRFKCNKDYALVGDRLSTCVESNNRPYDSDGVW
NTPAPKCQRITCIPDMKSPLHGSMECTDGSNAGSRCTFHCEDGYSMIGSMYTACVDEIGT
LRGVWQNPAPVCRPIQCTPSQEDPDNGRVFCSNGIQLGSVCRFMCSHGYAMLGTGMTTCL
NDGNGDTIGTWSAPPSRCKPIVCLPLHEAPTNGFVSCTNDAYLGSVCHFTCADDYKLMGN
PTCTCNEGRDGGVVGRWSDFAPVCRRKTCPGGLMDPLNGGTVCSDGIFLGSQCEFVCDEY
HMRVGALYSTCVELDDGSVEWDQPTPRCRPITCPDQFPLPHGEMSCTKSNFATSRCNFKC
TAEKYQLYPPGVTENHCMNNSRWNIEKPCCARSCPPFAVMDFVVILDSSSSVGSENWMKI
KTFTHQFLSTFILSPEGSQYSVFRYNRNVDINSQILLKDHPTNIEDFIYAFEQIPYDGSG
THTGKAINHAVDIVLAPGNGNRVNARDIVLVITDGKSQDDVGGPALRLRQTGATVFVLPI
MPPKGRLDMRQVRQIAGSEDNIIKDAIEGGFEALTEHFSKKVSNIICGNPCKHVLHDHLA
L
Nucleotide sequence
Length: 2,665
>KH2012:KH.C11.274.v1.A.ND1-1
AGTGAAGAATGAATTCTGTATCTATCTTATACTTAGTTGCAGGACTAGCATCTGTTGCAG
CCCTAAGGTGTTGGGAATGTAACAACGTCGGATCAAACGAGGAATGTATACAGCAAGGGA
AACTCGTGCAATGCGGAACTAACCAGGATGCTTGCCAAATTGAGTTACGTCACGGGGGCT
GGGGTTATAAAGTAATGATCTCTAAAAGATGCAAACAGTCACAAGCATGCGAGAACAACT
TTAATCAGAACCCTCAAAGTGCTTGGGAGTTCACGCAATGCAATCTACGCGTCCCATCAT
CAGTGTGTAGATGTTGTTGTAAGGGGAATGAATGCAACAAGGGAAGTCTCACTTGCTGGA
CTGACAATGCAACATGTGTGCCTTCCCACACTAACCCACGCAATGGCCGAGTGAGTTGCA
CCAACACTAATGAAGTTGGAAGTAGTTGTTCCTTTGATTGCAACACAGGATACAGATTGA
TTGGTTCACCTACATCAGTTTGTCAAAATGATGAAACATGGAGCAATGCTGCCCCCGAGT
GTCAACCCATCTTATGCCCTCCACCACATGTTGCGCCACCAAATGGAAATGTCAAGTGTA
CGAATAATAATCTTCTCGGCAGTAGGTGCAGATTCAAGTGCAACAAAGATTATGCTTTGG
TTGGTGATCGACTATCAACTTGTGTTGAAAGCAACAACAGACCTTATGATAGTGACGGTG
TATGGAACACTCCTGCACCAAAATGTCAAAGAATCACTTGCATACCTGACATGAAGTCAC
CACTACATGGCAGTATGGAGTGCACTGATGGATCAAATGCGGGGAGCAGATGTACATTCC
ATTGTGAAGATGGCTACAGCATGATTGGTAGCATGTACACAGCATGTGTGGATGAGATTG
GAACCTTAAGAGGGGTATGGCAGAACCCAGCACCTGTGTGTAGACCAATCCAGTGCACCC
CAAGCCAAGAAGATCCAGATAACGGCCGCGTTTTCTGTTCCAATGGAATACAACTTGGTT
CAGTTTGTCGTTTCATGTGTAGTCATGGTTACGCAATGTTAGGAACGGGCATGACAACTT
GTTTGAACGACGGGAACGGAGACACCATTGGCACCTGGAGCGCACCACCGTCACGATGCA
AACCAATTGTATGCTTGCCACTCCACGAGGCTCCCACTAATGGGTTTGTGTCGTGCACCA
ATGATGCCTACCTCGGGAGTGTATGCCACTTTACCTGCGCTGATGATTATAAACTAATGG
GCAATCCAACTTGCACTTGTAATGAGGGGCGTGATGGGGGCGTGGTAGGCAGATGGAGCG
ACTTTGCACCAGTGTGTAGGCGCAAGACTTGTCCAGGAGGTTTAATGGACCCTTTGAACG
GTGGAACAGTTTGTTCAGATGGTATTTTCCTTGGTTCTCAATGTGAATTTGTATGCGATG
AATATCACATGAGAGTTGGAGCACTGTACAGTACTTGTGTTGAGTTGGATGATGGATCTG
TTGAATGGGACCAACCTACACCTCGTTGCAGACCAATCACGTGTCCGGATCAATTCCCTC
TTCCTCATGGAGAGATGAGTTGTACGAAGAGTAACTTCGCCACCTCCCGTTGTAACTTCA
AATGTACAGCTGAGAAATATCAGTTATATCCACCTGGTGTAACCGAGAATCATTGCATGA
ATAACTCAAGGTGGAATATTGAGAAGCCGTGCTGTGCAAGATCATGTCCTCCCTTCGCTG
TGATGGACTTTGTTGTGATCCTCGATTCTTCTTCTTCTGTTGGATCCGAAAACTGGATGA
AAATAAAAACTTTCACCCACCAATTTTTATCAACTTTCATTCTTTCACCTGAAGGAAGCC
AGTACTCTGTGTTCCGGTACAACAGAAATGTTGATATCAACTCACAGATTTTGCTGAAAG
ACCATCCTACAAATATAGAGGACTTCATTTACGCATTCGAACAAATTCCATATGATGGTT
CAGGAACACACACAGGGAAAGCTATTAACCACGCAGTTGACATTGTACTTGCCCCCGGGA
ATGGAAATCGCGTCAACGCTCGTGATATTGTGTTGGTTATCACTGATGGTAAATCGCAAG
ACGACGTTGGAGGACCCGCGTTAAGACTTCGGCAAACAGGAGCAACTGTATTTGTCCTCC
CCATTATGCCACCTAAGGGAAGATTAGACATGAGACAAGTCCGACAGATCGCAGGATCGG
AAGACAACATCATAAAGGATGCAATCGAAGGAGGGTTCGAAGCACTCACTGAACATTTCT
CAAAGAAAGTGAGCAACATCATATGTGGAAACCCATGTAAACATGTTTTACACGACCATC
TGGCTTTGTAATGTAATTTTCTCATGATTGTGATGTAACAATGTTGTTTTTGTTATGTCA
CAACATCTTAATTGTGGCATAATATTCTCTTTGTTTTATCAATTAAAATAGCTTTTTCCT
ATTAATCTGCTTTTAATGATTAAAAACTTTTAATGATACTGATTTTGAAACTAATCAAAT
CATTGTAAATGATATGTTTTTCTGATTTTTAATTATTTATATTATTCTGATTCTTAATTT
TGATTTGGAATTGCCATTATTTTTGTTGTGTGTCAATTTATTTTGCTTTGTTGTTTAAAA
TAAAGAAACAAACATTTTGAAATAC
| ProSiteProfiles |
Sushi_SCR_CCP_dom (IPR000436) - T[122-181] 10.457 - T[182-249] 9.773 - T[250-314] 8.821 - T[315-380] 9.038 - T[381-446] 8.531 - T[447-510] 7.112 - T[511-572] 7.837 |
| SMART |
Sushi_SCR_CCP_dom (IPR000436) - T[124-179] 6.2E-12 - T[184-247] 1.2E-10 - T[253-312] 3.9E-6 - T[317-378] 7.3E-9 - T[383-444] 1.3E-8 - T[449-508] 7.5E-5 - T[513-570] 4.7 |
| CDD |
Sushi_SCR_CCP_dom (IPR000436) - T[126-180] 1.80199E-11 - T[184-248] 1.67224E-9 - T[254-313] 4.87729E-7 - T[319-379] 1.44482E-7 - T[385-445] 2.61404E-6 - T[453-509] 6.57257E-5 |
| SUPERFAMILY |
Sushi/SCR/CCP_sf (IPR035976) - T[128-189] 6.25E-15 - T[182-253] 8.34E-12 - T[255-319] 9.87E-11 - T[322-386] 2.92E-12 - T[388-450] 6.81E-11 - T[455-522] 6.12E-11 - T[511-577] 9.31E-6 |
| Pfam |
Sushi_SCR_CCP_dom (IPR000436) - T[129-179] 1.2E-9 - T[184-247] 1.5E-7 - T[256-312] 4.9E-6 - T[317-378] 2.7E-4 - T[390-444] 1.9E-5 - T[465-508] 0.0013 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[574-768] 3.02E-37 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[579-773] 2.1E-34 |
| SMART |
VWF_A (IPR002035) - T[579-766] 3.6E-23 |
| ProSiteProfiles |
VWF_A (IPR002035) - T[581-762] 22.95 |
| Pfam |
VWF_A (IPR002035) - T[581-740] 3.3E-27 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SVEP1_HUMAN | 30.075 % | 131 | 3.53E-31 |
| LYAM3_HUMAN | 30.474 % | 172 | 1.47E-44 |
| LYAM2_HUMAN | 27.463 % | 126 | 4.07E-30 |