Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 540

>KH.C1.1291.v1.R.ND1-1
FECILSKMRVLFFVSFISMLGSAIPAAVSQSQAVTYLMKFGHAPESNHMSGDLMTLSSLE
DSIRSFQRFADLPITGELDESTLRKMGEKRCGNPDIAGTDNAKRKKRYALQGSKWDHKHL
TYKFINHSPDLPASQVETEIRAAFQWWEDNSSLRFSKVAKSQRADIEILFSAGAHGDGDP
FDGPGQTLAHAYFPGSGGNAHFDEAERWSISSGSGKVNLRIVAAHEFGHSLGLSHSDVSE
ALMAPFYNPRSSGLHSDDIQAIQRLYGKSMVKPDIVTPKPTVPTTTRRTTTPRTTRRTTT
KVPPVGACNGRFDAITRLSNGSTYAFQGDMFWRLNDQNVDEGFPASIRTVWGISGKIDAA
LTYNGNTDIFQGHKVHRFRNGIRIQTSHISSRYGNVPSFIDAAFEWSGNGKIYFIKGEQY
WRYNPSRRTVDSGYPKPLSVWRGLPKHIDSAMQWNGKTYFFENGQYYRFDDNRIQVASST
KYPYPRRADEWWLGCKDNTLMTGLSQNSENGGGSGGASKSGVQVSLVLLSSIVMIFTALV

Nucleotide sequence

Length: 2,133

>KH2012:KH.C1.1291.v1.R.ND1-1
ACGAAGCATATCGGTTTTAGTTTGAGTGTATTTTAAGCAAAATGCGAGTTTTATTTTTTG
TTTCTTTTATTTCAATGCTTGGTAGCGCAATTCCTGCTGCTGTTTCTCAGTCACAAGCAG
TGACTTACTTGATGAAGTTCGGGCACGCCCCAGAAAGCAACCATATGTCTGGGGACTTAA
TGACGCTGTCCTCCCTTGAGGATTCTATTCGTTCATTTCAAAGATTCGCTGATCTCCCAA
TAACTGGTGAATTAGACGAGTCCACTTTGAGAAAAATGGGCGAAAAACGATGCGGAAACC
CAGACATTGCAGGAACTGACAATGCCAAACGAAAGAAGCGATATGCCCTTCAGGGAAGCA
AGTGGGATCATAAACATCTAACATACAAGTTTATCAACCATTCCCCTGACTTACCTGCCT
CGCAAGTCGAAACTGAAATCCGGGCTGCGTTTCAATGGTGGGAAGACAACTCAAGCCTAA
GATTCAGCAAAGTAGCAAAAAGTCAACGTGCTGATATTGAAATTTTGTTTTCTGCTGGTG
CCCACGGAGACGGCGACCCGTTTGACGGCCCTGGTCAAACTTTAGCACATGCTTACTTTC
CTGGCTCAGGAGGCAACGCTCATTTTGATGAAGCAGAGAGATGGTCCATAAGCAGTGGTT
CAGGAAAAGTTAACCTGAGAATTGTAGCGGCTCATGAGTTCGGACATAGTCTTGGTCTTT
CACACAGTGATGTTTCAGAAGCATTAATGGCTCCATTTTATAACCCGCGTTCAAGTGGTC
TTCATAGCGATGACATTCAAGCTATTCAGAGACTATACGGCAAATCAATGGTGAAACCAG
ACATAGTTACACCAAAGCCGACAGTACCTACTACAACAAGAAGAACCACAACTCCCAGAA
CTACACGAAGAACAACCACCAAAGTTCCACCTGTCGGTGCTTGTAACGGAAGATTTGATG
CCATCACTCGTCTCAGCAACGGTAGTACTTACGCTTTCCAAGGAGACATGTTCTGGAGGT
TAAATGACCAAAATGTTGACGAAGGATTCCCAGCTAGTATCCGTACAGTGTGGGGTATCA
GTGGTAAAATAGACGCTGCGCTGACGTACAACGGAAATACAGACATTTTCCAGGGCCACA
AAGTGCACAGATTTCGTAACGGGATAAGAATCCAGACGTCCCATATTTCATCACGTTATG
GAAACGTTCCTTCTTTTATTGATGCTGCCTTTGAATGGAGCGGAAACGGGAAGATATACT
TTATTAAAGGTGAGCAGTATTGGCGATACAATCCAAGCAGAAGAACGGTTGATTCTGGAT
ATCCGAAACCACTTAGTGTATGGCGTGGCTTGCCCAAACATATAGATTCAGCAATGCAAT
GGAATGGAAAGACATATTTCTTTGAGAATGGGCAATATTACAGATTTGACGACAACCGAA
TCCAAGTTGCAAGTTCAACCAAATACCCTTACCCACGGCGTGCGGACGAATGGTGGTTAG
GATGTAAAGATAATACACTGATGACCGGCCTGTCTCAAAACTCAGAAAATGGGGGTGGAA
GCGGTGGAGCCTCAAAATCTGGAGTTCAAGTTTCTCTTGTTCTTTTATCAAGCATCGTCA
TGATTTTTACAGCTTTGGTTTAGATGTTTTGATGCTATATTGTAGGTTGGGGGGAGACGG
GACACCTTTAGAATATATTTAAAATATACTGATCGTGTTTTAAACAATTAACAACGCGCT
ACGCGAGTCGTGAGGATACGGTTTTATAATTCATTGATTTTTTTTGTTTCCTACCAAACG
GGACAAGAAAATAGAATGAAAAGGTGTCCCATCTTTCCCCATCCGACTTACGTTTTTTGT
GTCTTTCTACGCACTTTACACATAACGCAGTATTCTATTTTCCTGTGCCTTTGTAAACCC
TTTGTTTATAGTTTCTCGCTACTTTATGATATTTATCGTGCCAAGATATTATTTGTTTTA
ATATTTATTTTCTTTATTGTATGTACTGTTCAAACGTTGCTTGGGAATACGTTCATATAA
ACGCGCAGGCGCGTATTTGCATTGACGTATTCTAATGAACTTGTATGTCGGTATCATATA
TACGACCGCATTTCTAAATACAAAAACACACAC

InterProScan

PIRSF	Pept_M10A (IPR021190) - T[3-514] 3.0E-142
Gene3D	MetalloPept_cat_dom_sf (IPR024079) - T[25-274] 5.3E-84
SUPERFAMILY	PGBD-like_sf (IPR036365) - T[32-96] 3.14E-15
Pfam	Peptidoglycan-bd-like (IPR002477) - T[35-86] 3.6E-7
PRINTS	Pept_M10A (IPR021190) - T[86-99] 5.3E-37 - T[140-155] 5.3E-37 - T[164-192] 5.3E-37 - T[222-247] 5.3E-37 - T[254-267] 5.3E-37
SMART	Peptidase_Metallo (IPR006026) - T[111-268] 8.9E-44
CDD	M10A_MMP (IPR033739) - T[114-267] 1.65677E-72
Pfam	Pept_M10_metallopeptidase (IPR001818) - T[114-267] 4.8E-54
SUPERFAMILY	Hemopexin-like_dom_sf (IPR036375) - T[304-495] 3.66E-53
Gene3D	Hemopexin-like_dom_sf (IPR036375) - T[306-498] 2.2E-54
CDD	Hemopexin-like_dom (IPR000585) - T[307-495] 2.08959E-42
ProSiteProfiles	Hemopexin-like_repeat (IPR018487) - T[309-354] 11.412 - T[397-444] 17.035 - T[445-495] 14.476
Pfam	Hemopexin-like_repeat (IPR018487) - T[312-353] 2.4E-10 - T[400-445] 2.4E-16 - T[448-495] 1.5E-8
SMART	Hemopexin-like_repeat (IPR018487) - T[312-355] 2.6E-10 - T[357-398] 8.3 - T[400-446] 8.7E-16 - T[448-495] 3.1E-6