- Clone 'CCTU14541' >
- Region 'REG00000193' >
- Region 'REG00000200' >
- Transcript 'Phfumi.CG.MTP2014.S6...' >
- Transcript 'KH2012:KH.C11.291.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.291.v1.A.nonSL2-1
Possible name(s)
TUBA1A; TUBA1B; TUBA3C
Gene model
Location
KhC11 [410,228 / 414,344]
Amino acid sequence
Length: 473
>KH.C11.291.v1.A.nonSL2-1
TSYSCSSFDRFLSQANPLLTFKMRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPS
DKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED
AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLS
VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD
IERPTYTNLNRLMGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISA
EKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK
RTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM
YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEGEGEEEGEEY
Nucleotide sequence
Length: 1,582
>KH2012:KH.C11.291.v1.A.nonSL2-1
GTATTCTGAACCAGCAAGACACGTAAACGTCATATAGCTGTTCGAGTTTTGATCGATTTT
TATCGCAAGCAAACCCACTACTAACCTTCAAGATGCGCGAATGTATCTCAATCCACGTCG
GACAAGCCGGAGTCCAAATCGGTAACGCTTGTTGGGAGTTGTACTGCCTTGAGCATGGCA
TCCAACCAGATGGTCAAATGCCAAGTGACAAGACCATTGGTGGAGGCGACGACTCTTTCA
ACACTTTCTTCAGCGAAACCGGAGCAGGGAAACATGTCCCAAGAGCCGTCTTCGTTGATC
TTGAGCCAACTGTTGTTGATGAGGTCCGAACCGGTACCTACCGTCAACTCTTCCACCCTG
AGCAGTTGATCACCGGCAAAGAAGATGCAGCCAACAACTACGCCCGTGGTCACTACACCA
TCGGTAAGGAGATCGTCGACCTCGTCCTCGACAGGATCCGAAAGCTCGCCGATCAGTGCA
CCGGCCTCCAAGGTTTCCTCATCTTCCACTCATTCGGAGGAGGCACCGGATCCGGATTCA
CCTCTCTTCTTATGGAGAGACTTTCCGTCGATTACGGCAAGAAGTCGAAACTTGAGTTCG
CTATCTACCCAGCACCCCAGGTTTCCACCGCTGTTGTTGAGCCGTACAACTCCATCCTTA
CCACCCATACCACCCTTGAGCATTCCGACTGCGCCTTCATGGTCGACAACGAAGCTATCT
ACGATATCTGCAGACGTAACTTGGACATTGAGAGACCAACCTACACCAACTTGAACCGAC
TTATGGGACAAATCGTTTCTTCCATCACCGCTTCCCTGAGATTCGATGGTGCTTTGAACG
TCGATCTTACCGAGTTCCAGACCAACTTGGTGCCATACCCACGTATTCACTTCCCATTGG
CCACATACGCTCCAGTCATCTCGGCAGAGAAGGCATACCATGAACAACTCTCTGTTGCCG
AAATCACCAACGCTTGCTTCGAGCCAGCCAACCAGATGGTGAAATGCGACCCACGTCACG
GCAAATACATGGCGTGCTGCATGTTGTACAGAGGTGACGTCGTCCCCAAGGACGTCAACG
CCGCTATTGCAACCATTAAGACCAAGAGAACCATCCAGTTCGTCGATTGGTGCCCAACTG
GTTTCAAGGTCGGTATCAACTACCAACCACCAACCGTCGTTCCAGGTGGTGACTTGGCCA
AGGTACAACGTGCCGTCTGCATGTTGAGCAACACCACTGCTATTGCAGAGGCATGGGCTC
GTCTTGACCATAAGTTCGACTTGATGTACGCCAAACGTGCTTTCGTCCACTGGTATGTCG
GTGAAGGTATGGAGGAAGGCGAGTTCTCTGAGGCTCGTGAGGATTTGGCAGCCCTTGAGA
AAGATTACGAAGAGGTTGGTGTCGATTCCGTTGAGGGCGAAGGCGAGGAAGAAGGAGAGG
AATATTAAACTCCCCAATAAAACCCCACTCATCGATATCTTATATATTTTAACACTTGGT
GACTTCTACTTTCAAATTACTTCTTCATATACCTTCAGGTTATGCGATAAAACTTTCGAA
ATAAAAGTGGGGAAACGATAAA
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[23-290] 1.6E-132 |
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[23-266] 5.1E-101 |
| PANTHER |
Tubulin (IPR000217) - T[24-469] 0.0 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[25-235] 4.4E-68 |
| PRINTS |
Tubulin (IPR000217) - T[32-52] 1.5E-90 - T[75-94] 1.5E-90 - T[117-128] 1.5E-90 - T[130-154] 1.5E-90 - T[156-174] 1.5E-90 - T[175-196] 1.5E-90 - T[200-213] 1.5E-90 - T[214-234] 1.5E-90 - T[402-430] 1.5E-90 |
| PRINTS |
Alpha_tubulin (IPR002452) - T[40-55] 7.7E-121 - T[67-80] 7.7E-121 - T[110-123] 7.7E-121 - T[142-150] 7.7E-121 - T[170-182] 7.7E-121 - T[183-194] 7.7E-121 - T[236-248] 7.7E-121 - T[296-311] 7.7E-121 - T[343-364] 7.7E-121 - T[369-382] 7.7E-121 - T[382-401] 7.7E-121 - T[407-423] 7.7E-121 - T[444-460] 7.7E-121 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[71-268] 4.2E-82 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[164-170] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[268-459] 5.49E-87 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[270-415] 1.8E-60 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[285-413] 3.2E-51 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[291-405] 8.3E-68 |
| Gene3D |
Tubulin_C (IPR023123) - T[406-472] 1.5E-35 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBA1A_HUMAN | 98.448 % | 939 | 0 |
| TBA1B_HUMAN | 98.004 % | 936 | 0 |
| TBA3C_HUMAN | 98.67 % | 930 | 0 |