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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C2.141.v2....' > 
  2. Transcript 'KH2012:KH.L9.27.v1.A...' > 
  3. Transcript 'KH2012:KH.C5.42.v1.A...' > 
  4. Transcript 'KH2012:KH.C8.71.v3.A...' > 
  5. Transcript 'KH2012:KH.C11.334.v1...'

Transcript Model

Transcript Id

KH2012:KH.C11.334.v1.A.SL4-1

Possible name(s)

CDT1

Gene model

KH2012:KH.C11.334

Location

KhC11 [840,669 / 846,124]

Sequences

Amino acid sequence

Length: 703

>KH.C11.334.v1.A.SL4-1
VYEFLLISADTHGGIHITMSQAAVTDYFTRRRNRGLVQPSKRQKINDVTPQLDTKELKIS
GKQKTKTKQKEGTEKRVTRSSTRKTTSKITTTISSLQEYFSPTNKNKSEPEVPPPCLPVT
VTTAARDDHDDPVTPSKRRNNELNDQSTVKRGRITPKKSFEFDESTTQVGTDFSETRSKK
KSARKRLTLRCDVTDDLCDVINKKDIKNDKSEKVLDSNLETIEESPCDVTKPSKSDQSTS
KPGRRKKIQTDKAVNIAEKLLNKDKSKESSKVVKEVLKGQGNLKDLQKTLLKMRELKKQE
KKSKKVDENKNEIKEKKEVKKRVFAHERFHSLAQEIPSGLSLPFKYKILQEMFQSADTVV
SMLFNRQQTTTWLKLHKAVKDMIKRKFELNDLGRIKHVYPDAYTFRQERGIPTYDDRIKS
TDYQLTIEPILTEEECDRASDEPRKLNSGMLVRRRHNFHLQLLSLVKFHHKEFLASLEPP
VVVDDAEIRRWHPQFPVDQVPDITVGELPTPPNLEKCSSAKDVLEKTKDRLTKKAFEALK
KVAEKCSTPEKSVTVETNNNQSPTKKPVSVKGVSQSLLAKIREKEASSKLRKMVRSDESE
KKIEKMKQLPDVARALRMLFVTEKKASLPLELIVARLAKCCPSVATPVLMEEHVRLLSEH
MTSWAIMMSLGKKEYLKLDKNRDISDVIKELQCKVKELENCAK

Nucleotide sequence

Length: 2,167

>KH2012:KH.C11.334.v1.A.SL4-1
GTTTATGAGTTTTTATTAATATCTGCTGATACACACGGCGGAATACACATTACGATGTCT
CAAGCTGCCGTCACAGATTATTTTACGCGTCGTCGAAATCGTGGTCTAGTGCAGCCTTCT
AAGCGGCAGAAAATAAACGATGTTACCCCACAACTTGACACGAAAGAACTTAAAATTTCC
GGCAAGCAGAAAACCAAAACTAAGCAAAAGGAAGGCACAGAGAAACGAGTTACTAGGTCC
AGCACTCGGAAAACCACGTCAAAAATTACGACAACAATTTCCTCCTTACAAGAATATTTT
AGTCCAACCAACAAAAATAAATCGGAACCAGAAGTTCCCCCACCGTGTCTTCCTGTTACC
GTGACAACGGCTGCTCGTGATGATCATGATGACCCCGTGACCCCGAGCAAAAGACGAAAC
AACGAACTTAATGATCAATCAACCGTAAAGCGGGGTCGAATCACTCCCAAAAAAAGTTTC
GAGTTCGACGAGTCAACGACTCAAGTCGGAACGGATTTTTCCGAAACTCGATCTAAGAAA
AAATCTGCTCGAAAGCGATTGACTCTTCGCTGTGATGTCACAGATGATTTATGTGATGTC
ATAAATAAAAAGGACATTAAAAATGACAAATCTGAAAAAGTTTTAGACAGTAATCTGGAA
ACGATAGAGGAGTCGCCTTGTGATGTCACAAAGCCGAGTAAATCCGACCAATCAACATCG
AAACCTGGGCGACGGAAGAAAATTCAAACGGACAAAGCTGTAAATATCGCAGAAAAACTT
TTAAACAAAGATAAATCAAAGGAATCTTCGAAAGTTGTGAAAGAAGTTTTGAAAGGTCAA
GGAAATCTAAAAGATCTTCAGAAAACTTTGTTAAAAATGAGAGAATTAAAAAAACAAGAG
AAAAAATCAAAGAAAGTGGACGAAAATAAAAACGAAATTAAAGAAAAGAAAGAAGTCAAG
AAACGAGTGTTCGCGCATGAACGATTTCATTCGTTAGCGCAAGAAATTCCTTCAGGGTTG
TCTTTGCCATTTAAATATAAGATTTTGCAAGAAATGTTTCAAAGTGCGGACACCGTTGTA
AGCATGTTGTTTAATCGACAGCAAACAACAACTTGGTTGAAACTTCATAAAGCTGTAAAA
GATATGATAAAAAGAAAGTTTGAACTAAATGACTTGGGTCGAATAAAACATGTTTACCCC
GATGCGTATACCTTCCGACAAGAACGAGGAATCCCAACTTATGACGATAGAATCAAATCA
ACGGATTATCAACTAACAATCGAACCAATTCTCACAGAAGAAGAGTGCGATAGAGCATCA
GACGAGCCACGAAAGTTAAACAGTGGAATGTTGGTTCGACGACGACATAATTTCCATCTC
CAACTTTTATCCCTTGTCAAGTTTCATCACAAGGAATTTCTTGCCTCTCTGGAGCCCCCA
GTGGTGGTGGATGATGCAGAAATTCGTCGTTGGCATCCTCAGTTTCCCGTCGATCAAGTC
CCTGATATCACAGTAGGGGAATTACCCACCCCACCCAACTTGGAGAAATGTAGTTCAGCC
AAAGATGTTTTGGAGAAAACTAAAGATAGGTTGACTAAAAAGGCGTTCGAAGCTTTAAAG
AAAGTTGCAGAAAAATGTTCCACGCCGGAAAAGTCCGTTACTGTGGAAACAAACAACAAC
CAATCACCTACCAAGAAACCTGTATCAGTTAAGGGGGTTTCCCAGTCTTTGTTGGCAAAG
ATTCGCGAAAAAGAAGCTTCGTCGAAACTTCGTAAGATGGTAAGATCAGATGAAAGTGAA
AAGAAGATTGAAAAGATGAAACAACTTCCGGATGTTGCAAGAGCTTTGCGGATGTTGTTC
GTTACTGAGAAAAAAGCAAGTTTGCCGCTGGAATTAATCGTAGCTCGGTTAGCTAAATGC
TGCCCTTCGGTGGCCACTCCTGTGCTAATGGAAGAACATGTTCGTTTACTATCCGAGCAT
ATGACGTCATGGGCTATTATGATGTCATTGGGGAAGAAAGAATATCTTAAGCTTGACAAG
AACAGAGACATAAGTGATGTCATAAAGGAGTTGCAATGTAAAGTCAAAGAGCTGGAAAAC
TGTGCAAAATAAATACTTTGGTTTTAATAATGTGTTGTGTAAGCGTGAATAAATATGTTG
GAAAATA

InterProScan

SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[325-513] 9.52E-48
Pfam
CDT1_Gemini-bd-like (IPR014939) - T[342-509] 5.5E-54
SMART
CDT1_Gemini-bd-like (IPR014939) - T[342-510] 8.1E-67
Pfam
Cdt1_C (IPR032054) - T[574-665] 5.4E-17

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CDT1_HUMAN 38.679 % 302 2.47E-94