Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C11.334.v2.A.SL2-1

Possible name(s)

CDT1

Gene model

KH2012:KH.C11.334

Location

KhC11 [840,669 / 845,129]

Sequences

Amino acid sequence

Length: 445

>KH.C11.334.v2.A.SL2-1
KLLNKDKSKESSKVVKEVLKGQGNLKDLQKTLLKMRELKKQEKKSKKVDENKNEIKEKKE
VKKRVFAHERFHSLAQEIPSGLSLPFKYKILQEMFQSADTVVSMLFNRQQTTTWLKLHKA
VKDMIKRKFELNDLGRIKHVYPDAYTFRQERGIPTYDDRIKSTDYQLTIEPILTEEECDR
ASDEPRKLNSGMLVRRRHNFHLQLLSLVKFHHKEFLASLEPPVVVDDAEIRRWHPQFPVD
QVPDITVGELPTPPNLEKCSSAKDVLEKTKDRLTKKAFEALKKVAEKCSTPEKSVTVETN
NNQSPTKKPVSVKGVSQSLLAKIREKEASSKLRKMVRSDESEKKIEKMKQLPDVARALRM
LFVTEKKASLPLELIVARLAKCCPSVATPVLMEEHVRLLSEHMTSWAIMMSLGKKEYLKL
DKNRDISDVIKELQCKVKELENCAK

Nucleotide sequence

Length: 1,395

>KH2012:KH.C11.334.v2.A.SL2-1
AAAAACTTTTAAACAAAGATAAATCAAAGGAATCTTCGAAAGTTGTGAAAGAAGTTTTGA
AAGGTCAAGGAAATCTAAAAGATCTTCAGAAAACTTTGTTAAAAATGAGAGAATTAAAAA
AACAAGAGAAAAAATCAAAGAAAGTGGACGAAAATAAAAACGAAATTAAAGAAAAGAAAG
AAGTCAAGAAACGAGTGTTCGCGCATGAACGATTTCATTCGTTAGCGCAAGAAATTCCTT
CAGGGTTGTCTTTGCCATTTAAATATAAGATTTTGCAAGAAATGTTTCAAAGTGCGGACA
CCGTTGTAAGCATGTTGTTTAATCGACAGCAAACAACAACTTGGTTGAAACTTCATAAAG
CTGTAAAAGATATGATAAAAAGAAAGTTTGAACTAAATGACTTGGGTCGAATAAAACATG
TTTACCCCGATGCGTATACCTTCCGACAAGAACGAGGAATCCCAACTTATGACGATAGAA
TCAAATCAACGGATTATCAACTAACAATCGAACCAATTCTCACAGAAGAAGAGTGCGATA
GAGCATCAGACGAGCCACGAAAGTTAAACAGTGGAATGTTGGTTCGACGACGACATAATT
TCCATCTCCAACTTTTATCCCTTGTCAAGTTTCATCACAAGGAATTTCTTGCCTCTCTGG
AGCCCCCAGTGGTGGTGGATGATGCAGAAATTCGTCGTTGGCATCCTCAGTTTCCCGTCG
ATCAAGTCCCTGATATCACAGTAGGGGAATTACCCACCCCACCCAACTTGGAGAAATGTA
GTTCAGCCAAAGATGTTTTGGAGAAAACTAAAGATAGGTTGACTAAAAAGGCGTTCGAAG
CTTTAAAGAAAGTTGCAGAAAAATGTTCCACGCCGGAAAAGTCCGTTACTGTGGAAACAA
ACAACAACCAATCACCTACCAAGAAACCTGTATCAGTTAAGGGGGTTTCCCAGTCTTTGT
TGGCAAAGATTCGCGAAAAAGAAGCTTCGTCGAAACTTCGTAAGATGGTAAGATCAGATG
AAAGTGAAAAGAAGATTGAAAAGATGAAACAACTTCCGGATGTTGCAAGAGCTTTGCGGA
TGTTGTTCGTTACTGAGAAAAAAGCAAGTTTGCCGCTGGAATTAATCGTAGCTCGGTTAG
CTAAATGCTGCCCTTCGGTGGCCACTCCTGTGCTAATGGAAGAACATGTTCGTTTACTAT
CCGAGCATATGACGTCATGGGCTATTATGATGTCATTGGGGAAGAAAGAATATCTTAAGC
TTGACAAGAACAGAGACATAAGTGATGTCATAAAGGAGTTGCAATGTAAAGTCAAAGAGC
TGGAAAACTGTGCAAAATAAATACTTTGGTTTTAATAATGTGTTGTGTAAGCGTGAATAA
ATATGTTGGAAAATA

InterProScan

SUPERFAMILY	WH_DNA-bd_sf (IPR036390) - T[67-255] 3.81E-48
Pfam	CDT1_Gemini-bd-like (IPR014939) - T[84-251] 2.3E-54
SMART	CDT1_Gemini-bd-like (IPR014939) - T[84-252] 8.1E-67
Pfam	Cdt1_C (IPR032054) - T[316-407] 2.7E-17

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CDT1_HUMAN	38.106 %	300	8.47E-97