- Transcript 'Moocci.CG.ELv1_2.S24...' >
- Transcript 'KH2012:KH.L122.9.v1....' >
- Transcript 'KH2012:KH.L122.9.v1....' >
- Clone 'AHC0AAA204YC10' >
- Transcript 'KH2012:KH.C11.349.v3...'
Transcript Model
Transcript Id
KH2012:KH.C11.349.v3.A.SL2-1
Possible name(s)
AC011530.1; DMWD; WDR20
Gene model
Location
KhC11 [5,140,780 / 5,151,805]
Amino acid sequence
Length: 678
>KH.C11.349.v3.A.SL2-1
CCNVVNVENIAWIKMSAEGGIRDGNVKVHFNTREGVYKQMPISEYFYPKRVPFTQGPAST
STPVKTSFVKVNDGKEDQDCVCLTVGRELFYFMYKSIKDHSQPLEFLDKRTYKGVAPTCH
DINQKSANAESVKVAVGFIAGQVQIIDVGTKQSLQIMNEDRCVEKSKVTCVRWFPNSENT
LLSAHISGFMYTYDVSQPCPNVVPQYHSHPDKVGDGYMIHSIKVKSSTSNTNGNGVGTGN
PLCRWTMTTDGSGVHNFSFSPCGRFIAIVTQNGYLRILDINTYDLLGCMKSYFGGLLSCC
WSPDGRYVVTGGEDDLISVWSFCEKNVIARGRGHKSWVNDVSFDPFCCSIPSDADMKSFY
GIPSLSEVFPDVKKSDSVNNNSPGGVEGKVEKHHERLNGDVSVPISAVKRMRTYSNISKF
SRLSIGLDSGAPAVCYRFGSVGQDSQLCIWELDETTLCFFNKTVDCGENSLTPSSDSFHA
NSEPLTESLTNLPEINGAYGVGHNGGSTQHENYLPKEVTTSSRSNSTPHSINSAKIKRSL
KHDSEQQITSGKFLTLGPHDRKKANKEHKRNLSLPHFGFKSSSSPSNQGPQKYGFQHRKH
QPTKTIVFGTPRCPKMADTAILEPLVCKKISQGQITCIDFMWDSVVTTCQDGFIQLWKRP
NSIQSPLSEGSKPSGTVV
Nucleotide sequence
Length: 2,507
>KH2012:KH.C11.349.v3.A.SL2-1
ATATTTAATTACTTTGCCTGGATATCGTTGAAACAGTTGAAATGATGTTGCAATGTTGTT
AATGTGGAAAACATTGCGTGGATTAAAATGTCAGCTGAAGGAGGAATAAGAGACGGGAAT
GTGAAAGTTCATTTTAATACAAGGGAGGGCGTTTATAAACAAATGCCGATCTCAGAGTAT
TTCTACCCCAAACGTGTTCCATTCACACAGGGACCAGCGTCAACCTCCACTCCGGTAAAA
ACATCGTTTGTGAAAGTTAACGACGGTAAGGAAGATCAAGATTGTGTTTGTCTCACTGTG
GGAAGGGAGTTGTTCTACTTCATGTACAAATCAATTAAAGATCATTCCCAACCGTTGGAA
TTCCTCGACAAACGAACTTACAAAGGTGTCGCCCCGACCTGCCACGATATCAACCAGAAA
AGCGCGAACGCCGAAAGTGTGAAGGTCGCTGTCGGGTTTATTGCCGGTCAAGTTCAAATC
ATAGATGTCGGGACAAAGCAAAGTCTTCAAATCATGAATGAAGATAGATGCGTGGAGAAA
TCTAAAGTAACGTGTGTAAGGTGGTTCCCCAACAGTGAGAACACGTTACTATCGGCACAT
ATAAGTGGATTCATGTACACGTATGATGTTTCACAGCCTTGCCCCAATGTAGTGCCTCAA
TATCATTCACATCCGGACAAAGTCGGCGACGGCTATATGATCCACAGCATCAAGGTGAAG
AGTTCGACTTCCAACACCAACGGTAACGGGGTGGGGACGGGTAACCCGCTATGCAGATGG
ACGATGACGACCGATGGGTCAGGGGTTCACAACTTCAGCTTCTCGCCTTGTGGGAGGTTT
ATTGCTATTGTTACCCAGAACGGCTACTTACGAATCCTTGATATAAACACATACGACCTA
CTTGGTTGCATGAAAAGTTACTTTGGTGGTTTGCTCTCTTGTTGTTGGAGCCCTGATGGT
AGATACGTGGTAACAGGTGGAGAGGACGATCTTATTTCGGTGTGGTCGTTCTGTGAGAAG
AATGTCATTGCGCGCGGTAGAGGTCATAAATCGTGGGTGAATGACGTCTCGTTTGACCCC
TTCTGTTGTTCCATACCTTCCGATGCCGACATGAAAAGTTTCTACGGGATACCGAGCCTT
AGTGAGGTGTTTCCGGACGTTAAGAAGTCGGACTCGGTGAATAATAATTCCCCCGGCGGT
GTGGAGGGGAAAGTGGAGAAACATCATGAACGTTTAAACGGGGACGTATCAGTCCCTATC
AGCGCGGTTAAACGGATGCGCACGTACAGTAATATATCAAAGTTTTCAAGGTTAAGCATC
GGGTTGGACAGCGGGGCGCCAGCCGTGTGCTACAGGTTTGGCTCCGTTGGCCAGGATTCC
CAGTTGTGTATTTGGGAGTTAGATGAAACAACTTTGTGTTTTTTTAACAAAACCGTGGAT
TGCGGGGAAAACTCTTTAACGCCATCGAGCGATTCGTTCCACGCAAACAGCGAACCGTTA
ACTGAAAGTTTAACCAACTTACCGGAAATTAACGGGGCGTATGGAGTGGGGCATAACGGG
GGAAGCACCCAACACGAGAACTATTTACCCAAAGAAGTGACGACGTCATCGCGGTCCAAC
AGCACCCCACACTCGATAAACTCAGCCAAGATCAAGCGCTCTCTAAAACATGACTCGGAA
CAACAAATAACAAGCGGAAAGTTTTTAACACTGGGTCCGCACGACCGTAAGAAAGCAAAC
AAGGAACATAAGCGGAACCTCAGCCTCCCACACTTCGGGTTCAAATCCTCCTCGAGCCCA
AGCAACCAGGGGCCACAAAAATATGGGTTCCAGCACAGGAAACATCAGCCAACCAAGACA
ATTGTATTCGGTACGCCACGGTGCCCGAAAATGGCCGACACTGCGATATTAGAACCTTTG
GTTTGTAAGAAAATCTCCCAAGGCCAAATAACTTGCATAGACTTCATGTGGGACAGCGTG
GTAACCACGTGTCAGGACGGGTTCATACAACTGTGGAAACGACCAAATAGCATCCAGTCC
CCACTAAGTGAAGGTTCCAAACCAAGTGGTACGGTTGTATAAACAATCATTCAGATTATT
CTTCAAACAACAAGTCTTGCTCCAATGTGCCTTTACCATGTACAGTGATTGTGCAATCCT
GGTCCATAGAAACAAAGATAGGAATTGTTGTTTCCCCAACACATAATAATTGTCATTATG
ATGAATCTCCCCATGTTGTATTGCATGTGAAAAGTTTCCAATAGTTTTAGCGCAAGCTTT
GTTTTAAAATCGTGGAAAAACCAGTCAACAAATTAATTGTTCCACACTGTTATGATTTAC
GTTCGCTGCTGGTGTAATGTTTAATTTATTCTACCAGCCAGCACTGGCTGATATTTTTGT
CAAGACGTAATTTATATTAACACGAAAATGATGAAATTTTTATGCTTCATCATGGTATCG
TGTATGATGTTTATGCGTGCACTTGCGATTAATACATATGAATAATG
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[130-207] 2.56E-34 - T[243-348] 2.56E-34 - T[437-453] 2.56E-34 - T[621-661] 2.56E-34 |
| SMART |
WD40_repeat (IPR001680) - T[150-194] 2.2 - T[238-279] 1.4 - T[282-321] 3.2E-5 - T[324-451] 46.0 - T[623-658] 6.2 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[247-345] 14.503 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[289-330] 10.642 |
| Pfam |
WD40_repeat (IPR001680) - T[296-321] 8.1E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| WDR20_HUMAN | 40.729 % | 442 | 3.13E-148 |
| DMWD_HUMAN | 46.691 % | 261 | 6.77E-78 |