- Clone 'cicl041m12' >
- Region 'REG00000292' >
- Transcript 'KH2012:KH.C11.385.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.385.v1.B.nonSL6-1
Possible name(s)
CARMIL1; CARMIL2; CARMIL3
Gene model
Location
KhC11 [5,087,091 / 5,101,685]
Amino acid sequence
Length: 1,073
>KH.C11.385.v1.B.nonSL6-1
CCCVDIAMEGVEIITDDGGGVYDKEAEANKPRSRPVSGEDRPLSGESLNLSGTVKRGYKM
SHIDQDAVSLSATLKRGMRNQGMLEAIPTGKTDSPGSPRGSKRFSFKSPKKSKKLSSKND
DTISIMSSAESHFNYPRGLRIEDVRGTPFDDTVSMIGGYIMDAGPFQQQDGIRDTIGRKN
IVTLKKMVKLERGNVAVDPKVLVLTPYRFQILSTKAPFKMEADIHFLEIKALDSPTPERL
IVTTDTGKIYFMQMIGTDDADHIIGRVALSLRTIFPNVALSRIIKASLEPLGRQKIIQSM
LNQGDQSEPGPCGNFSEMYRCICDYLGAPVREEVEWDVDTIYLSQNCKEINTKDFDLPDT
KDIIPIISVMIYSQWFDGLVVRNTKLSFEVLEFILKVTRNSHNLKELSLEGVGIKGEFAH
RLSINMIENKECRIEVLDLSGNSIEDKGLVHLSGSLPVIKHGKVNIITYDTGITGKSINV
LCQALRSSQRIMTTLTHLNLSGNNIRPEEAEGLLNFLSTENQITDLDLSATEGAVELYLS
AIAKGCTKYLENVSLGKNVFQTNKDTAIPPSVMHYFHKTTSLKNMDISHTKMPPEAIRYI
MDGILANKTPGLRVALNLSSCELKSMGCHIIQSCVASLTNLVSLDLTDNMLDGDLLPLLG
CMQQNRSITEFKIGRNFFGVKPKYMRQVMEGIVELMQEEDSVLQTFCIADSKLREHLHIL
LGCLGSNTSLTSIDISGNYMGDNGARVLSKSLQINSKLQVVKLDRNSLTSLGFHEVANAM
EKNYTLRYMPYPVNDAVIAIKMHPERTQRSLARIQDLLLRNANATGGSNDQQFRLQQVVT
NTAQQVLDRVAEKVDDTVNALEILVEDSASNDSVITAKKLVKDAKNSKQLLSDIYGIGME
KCSGDESPLVSKIRETAKNLNKIVEENITKTIESMMKTVEAQCPHIFMDIREELERSIET
KCQLPKDSVKDYVMHTSGSVIVNQVSELNLSMATLMSDRIADRLLGALSQSNLTLTDQLN
RHKQKENVGKRATEDVVQVDEDGALLPDMRRNRAASIAKRKQRPDVQSSLMT+
Nucleotide sequence
Length: 3,272
>KH2012:KH.C11.385.v1.B.nonSL6-1
GACTTCACTGTATACGCTTTCGCGAGTTTATAACTCAGCTTATTTGAGGCCTTAATGTTG
TTGTGTAGATATTGCTATGGAAGGGGTTGAGATTATTACAGACGATGGCGGGGGGGTGTA
CGACAAGGAAGCGGAAGCTAACAAGCCAAGATCTCGCCCAGTAAGTGGGGAGGACCGCCC
GCTATCGGGGGAATCCCTCAATTTAAGCGGGACAGTTAAACGAGGTTACAAGATGTCCCA
CATCGATCAAGATGCTGTTAGTTTGAGCGCAACGTTAAAGAGAGGGATGCGGAACCAGGG
CATGCTTGAAGCGATCCCCACCGGCAAGACTGACTCTCCTGGATCACCACGTGGTTCTAA
AAGGTTCAGTTTCAAATCACCAAAGAAATCAAAGAAACTATCAAGCAAAAATGATGACAC
AATTAGCATTATGAGCTCGGCAGAGTCTCATTTCAACTACCCACGAGGATTACGAATAGA
GGACGTACGGGGAACCCCCTTCGATGATACCGTGAGCATGATCGGAGGTTACATCATGGA
CGCTGGGCCTTTCCAACAGCAAGATGGAATCCGAGACACAATTGGAAGAAAGAACATTGT
GACGTTGAAGAAGATGGTTAAACTTGAACGTGGTAACGTCGCTGTGGATCCTAAAGTTCT
GGTCCTTACACCCTATAGATTCCAAATCCTTTCAACCAAAGCTCCGTTCAAGATGGAAGC
TGACATTCACTTCTTGGAGATCAAAGCACTGGATAGCCCGACACCTGAACGGTTAATCGT
CACCACGGACACAGGAAAGATATACTTCATGCAGATGATCGGGACGGATGATGCCGATCA
CATCATTGGGAGGGTGGCGTTGTCGCTTCGAACAATCTTCCCCAATGTCGCGCTTTCTCG
GATCATCAAAGCATCGTTGGAACCACTGGGCCGGCAGAAGATCATCCAATCCATGCTCAA
CCAGGGTGACCAATCGGAACCCGGGCCGTGTGGAAACTTCTCCGAGATGTATCGTTGTAT
TTGTGACTACTTGGGGGCGCCAGTGAGGGAAGAGGTTGAATGGGATGTAGACACGATATA
TTTGTCGCAAAACTGCAAGGAAATTAACACCAAGGATTTTGACTTACCTGATACTAAAGA
CATCATTCCCATTATATCAGTGATGATTTACAGCCAGTGGTTTGATGGGTTGGTGGTCAG
GAATACTAAACTGAGTTTCGAAGTGTTGGAGTTCATATTAAAAGTGACGCGGAACTCGCA
TAACTTGAAGGAGTTGTCGTTGGAGGGTGTTGGAATAAAAGGCGAGTTTGCGCACCGTCT
TTCAATCAACATGATTGAGAATAAGGAATGTAGAATCGAGGTTTTGGATTTATCTGGGAA
TTCCATTGAAGACAAAGGGCTGGTACATCTGAGTGGTTCACTCCCTGTAATTAAACATGG
AAAGGTTAATATTATCACGTATGACACAGGTATCACAGGCAAGTCAATCAACGTTTTATG
CCAAGCTTTGCGTTCAAGTCAGCGGATTATGACAACGCTGACTCATCTTAACTTATCGGG
GAATAATATTCGTCCTGAGGAAGCTGAGGGACTTCTCAATTTCTTATCGACCGAAAACCA
GATCACTGACCTTGACCTTTCTGCCACCGAAGGCGCTGTTGAGCTGTACCTCAGTGCGAT
AGCGAAAGGTTGCACAAAATATTTGGAAAACGTTTCGCTCGGAAAGAATGTTTTCCAAAC
AAACAAAGACACGGCCATCCCACCCTCGGTCATGCATTATTTCCACAAAACAACTTCATT
GAAAAACATGGATATCTCCCACACAAAGATGCCACCCGAAGCTATTAGGTACATCATGGA
TGGGATACTTGCGAACAAAACACCCGGGTTACGAGTTGCGTTGAATCTATCAAGTTGTGA
GTTGAAATCCATGGGTTGCCACATCATCCAATCTTGCGTGGCAAGTTTAACGAACCTCGT
TTCCCTCGATCTAACCGACAATATGTTGGATGGTGACTTACTGCCTTTACTTGGTTGTAT
GCAGCAAAACCGTTCGATCACTGAGTTTAAGATTGGTCGTAATTTCTTTGGTGTGAAACC
AAAGTATATGAGGCAAGTAATGGAGGGGATCGTTGAGTTGATGCAAGAAGAAGATTCCGT
CCTACAAACGTTCTGCATCGCCGATTCCAAACTCCGAGAACATCTTCATATTTTACTCGG
ATGTCTTGGGAGCAACACCTCGCTCACAAGCATCGACATCAGTGGCAACTACATGGGGGA
CAACGGGGCACGAGTGTTGTCCAAATCCCTTCAAATCAACAGCAAACTACAAGTTGTTAA
GTTAGATAGAAACAGTCTCACATCACTGGGTTTCCATGAGGTGGCAAATGCTATGGAAAA
GAACTACACACTACGATACATGCCGTACCCCGTCAACGATGCCGTCATCGCCATCAAGAT
GCATCCGGAACGGACACAAAGATCTCTCGCTCGCATCCAGGATTTGTTGCTGAGGAACGC
CAATGCCACCGGAGGCAGCAACGATCAGCAGTTCCGTCTTCAACAAGTTGTAACGAACAC
TGCTCAACAAGTGCTCGATAGAGTGGCAGAGAAAGTCGACGACACGGTAAACGCCCTTGA
GATTTTGGTTGAAGATTCGGCTTCCAATGATTCCGTCATTACTGCTAAGAAACTTGTCAA
GGATGCAAAGAATTCCAAACAGCTTTTATCAGATATCTATGGCATTGGGATGGAGAAGTG
CTCGGGTGACGAGAGCCCTCTAGTGTCCAAGATCAGGGAAACTGCGAAAAACTTGAATAA
AATCGTCGAAGAAAATATCACGAAAACAATTGAAAGTATGATGAAAACAGTGGAAGCTCA
ATGTCCTCATATATTTATGGATATAAGGGAAGAGTTGGAAAGATCAATTGAAACAAAATG
TCAACTCCCCAAAGATTCGGTGAAGGATTACGTGATGCATACTTCAGGGAGTGTTATTGT
TAACCAAGTCAGTGAATTAAACTTATCAATGGCAACCTTGATGTCGGACAGGATCGCCGA
TAGATTGTTGGGAGCTTTGTCGCAAAGTAATCTTACATTGACGGATCAACTGAACAGACA
CAAACAGAAGGAGAATGTTGGGAAAAGAGCAACAGAGGATGTTGTTCAAGTTGACGAGGA
TGGTGCGTTGCTCCCCGATATGAGGAGGAACAGGGCTGCAAGCATCGCGAAGAGGAAACA
ACGACCTGATGTCCAGTCTTCCCTCATGACAG
| Gene3D |
PH-like_dom_sf (IPR011993) - T[162-271] 9.7E-27 |
| PANTHER |
CARMIL1 (IPR029764) - T[169-1025] 3.3E-234 |
| Gene3D |
LRR_dom_sf (IPR032675) - T[315-821] 1.3E-125 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[433-453] 0.031 - T[493-508] 0.025 - T[726-748] 0.023 |
| Pfam |
CARMIL_C (IPR031943) - T[940-1065] 4.0E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CARL1_HUMAN | 39.145 % | 627 | 0 |
| CARL3_HUMAN | 32.497 % | 490 | 5.27E-153 |
| CARL2_HUMAN | 30.147 % | 398 | 1.09E-118 |