- Clone 'cicl041m12' >
- Region 'REG00000292' >
- Transcript 'KH2012:KH.C11.385.v1...' >
- Transcript 'KH2012:KH.C11.385.v4...'
Transcript Model
Transcript Id
KH2012:KH.C11.385.v4.B.SL9-1
Possible name(s)
CARMIL1; CARMIL2; CARMIL3
Gene model
Location
KhC11 [5,087,091 / 5,100,782]
Amino acid sequence
Length: 1,041
>KH.C11.385.v4.B.SL9-1
SRPVSGEDRPLSGESLNLSGTVKRGYKMSHIDQDAVSLSATLKRGMRNQGMLEAIPTGKT
DSPGSPRGSKRFSFKSPKKSKKLSSKNDDTISIMSSAESHFNYPRGLRIEDVRGTPFDDT
VSMIGGYIMDAGPFQQQDGIRDTIGRKNIVTLKKMVKLERGNVAVDPKVLVLTPYRFQIL
STKAPFKMEADIHFLEIKALDSPTPERLIVTTDTGKIYFMQMIGTDDADHIIGRVALSLR
TIFPNVALSRIIKASLEPLGRQKIIQSMLNQGDQSEPGPCGNFSEMYRCICDYLGAPVRE
EVEWDVDTIYLSQNCKEINTKDFDLPDTKDIIPIISVMIYSQWFDGLVVRNTKLSFEVLE
FILKVTRNSHNLKELSLEGVGIKGEFAHRLSINMIENKECRIEVLDLSGNSIEDKGLVHL
SGSLPVIKHGKVNIITYDTGITGKSINVLCQALRSSQRIMTTLTHLNLSGNNIRPEEAEG
LLNFLSTENQITDLDLSATEGAVELYLSAIAKGCTKYLENVSLGKNVFQTNKDTAIPPSV
MHYFHKTTSLKNMDISHTKMPPEAIRYIMDGILANKTPGLRVALNLSSCELKSMGCHIIQ
SCVASLTNLVSLDLTDNMLDGDLLPLLGCMQQNRSITEFKIGRNFFGVKPKYMRQVMEGI
VELMQEEDSVLQTFCIADSKLREHLHILLGCLGSNTSLTSIDISGNYMGDNGARVLSKSL
QINSKLQVVKLDRNSLTSLGFHEVANAMEKNYTLRYMPYPVNDAVIAIKMHPERTQRSLA
RIQDLLLRNANATGGSNDQQFRLQQVVTNTAQQVLDRVAEKVDDTVNALEILVEDSASND
SVITAKKLVKDAKNSKQLLSDIYGIGMEKCSGDESPLVSKIRETAKNLNKIVEENITKTI
ESMMKTVEAQCPHIFMDIREELERSIETKCQLPKDSVKDYVMHTSGSVIVNQVSELNLSM
ATLMSDRIADRLLGALSQSNLTLTDQLNRHKQKENVGKRATEDVVQVDEDGALLPDMRRN
RAASIAKRKQRPDVQSSLMT+
Nucleotide sequence
Length: 3,122
>KH2012:KH.C11.385.v4.B.SL9-1
ATCTCGCCCAGTAAGTGGGGAGGACCGCCCGCTATCGGGGGAATCCCTCAATTTAAGCGG
GACAGTTAAACGAGGTTACAAGATGTCCCACATCGATCAAGATGCTGTTAGTTTGAGCGC
AACGTTAAAGAGAGGGATGCGGAACCAGGGCATGCTTGAAGCGATCCCCACCGGCAAGAC
TGACTCTCCTGGATCACCACGTGGTTCTAAAAGGTTCAGTTTCAAATCACCAAAGAAATC
AAAGAAACTATCAAGCAAAAATGATGACACAATTAGCATTATGAGCTCGGCAGAGTCTCA
TTTCAACTACCCACGAGGATTACGAATAGAGGACGTACGGGGAACCCCCTTCGATGATAC
CGTGAGCATGATCGGAGGTTACATCATGGACGCTGGGCCTTTCCAACAGCAAGATGGAAT
CCGAGACACAATTGGAAGAAAGAACATTGTGACGTTGAAGAAGATGGTTAAACTTGAACG
TGGTAACGTCGCTGTGGATCCTAAAGTTCTGGTCCTTACACCCTATAGATTCCAAATCCT
TTCAACCAAAGCTCCGTTCAAGATGGAAGCTGACATTCACTTCTTGGAGATCAAAGCACT
GGATAGCCCGACACCTGAACGGTTAATCGTCACCACGGACACAGGAAAGATATACTTCAT
GCAGATGATCGGGACGGATGATGCCGATCACATCATTGGGAGGGTGGCGTTGTCGCTTCG
AACAATCTTCCCCAATGTCGCGCTTTCTCGGATCATCAAAGCATCGTTGGAACCACTGGG
CCGGCAGAAGATCATCCAATCCATGCTCAACCAGGGTGACCAATCGGAACCCGGGCCGTG
TGGAAACTTCTCCGAGATGTATCGTTGTATTTGTGACTACTTGGGGGCGCCAGTGAGGGA
AGAGGTTGAATGGGATGTAGACACGATATATTTGTCGCAAAACTGCAAGGAAATTAACAC
CAAGGATTTTGACTTACCTGATACTAAAGACATCATTCCCATTATATCAGTGATGATTTA
CAGCCAGTGGTTTGATGGGTTGGTGGTCAGGAATACTAAACTGAGTTTCGAAGTGTTGGA
GTTCATATTAAAAGTGACGCGGAACTCGCATAACTTGAAGGAGTTGTCGTTGGAGGGTGT
TGGAATAAAAGGCGAGTTTGCGCACCGTCTTTCAATCAACATGATTGAGAATAAGGAATG
TAGAATCGAGGTTTTGGATTTATCTGGGAATTCCATTGAAGACAAAGGGCTGGTACATCT
GAGTGGTTCACTCCCTGTAATTAAACATGGAAAGGTTAATATTATCACGTATGACACAGG
TATCACAGGCAAGTCAATCAACGTTTTATGCCAAGCTTTGCGTTCAAGTCAGCGGATTAT
GACAACGCTGACTCATCTTAACTTATCGGGGAATAATATTCGTCCTGAGGAAGCTGAGGG
ACTTCTCAATTTCTTATCGACCGAAAACCAGATCACTGACCTTGACCTTTCTGCCACCGA
AGGCGCTGTTGAGCTGTACCTCAGTGCGATAGCGAAAGGTTGCACAAAATATTTGGAAAA
CGTTTCGCTCGGAAAGAATGTTTTCCAAACAAACAAAGACACGGCCATCCCACCCTCGGT
CATGCATTATTTCCACAAAACAACTTCATTGAAAAACATGGATATCTCCCACACAAAGAT
GCCACCCGAAGCTATTAGGTACATCATGGATGGGATACTTGCGAACAAAACACCCGGGTT
ACGAGTTGCGTTGAATCTATCAAGTTGTGAGTTGAAATCCATGGGTTGCCACATCATCCA
ATCTTGCGTGGCAAGTTTAACGAACCTCGTTTCCCTCGATCTAACCGACAATATGTTGGA
TGGTGACTTACTGCCTTTACTTGGTTGTATGCAGCAAAACCGTTCGATCACTGAGTTTAA
GATTGGTCGTAATTTCTTTGGTGTGAAACCAAAGTATATGAGGCAAGTAATGGAGGGGAT
CGTTGAGTTGATGCAAGAAGAAGATTCCGTCCTACAAACGTTCTGCATCGCCGATTCCAA
ACTCCGAGAACATCTTCATATTTTACTCGGATGTCTTGGGAGCAACACCTCGCTCACAAG
CATCGACATCAGTGGCAACTACATGGGGGACAACGGGGCACGAGTGTTGTCCAAATCCCT
TCAAATCAACAGCAAACTACAAGTTGTTAAGTTAGATAGAAACAGTCTCACATCACTGGG
TTTCCATGAGGTGGCAAATGCTATGGAAAAGAACTACACACTACGATACATGCCGTACCC
CGTCAACGATGCCGTCATCGCCATCAAGATGCATCCGGAACGGACACAAAGATCTCTCGC
TCGCATCCAGGATTTGTTGCTGAGGAACGCCAATGCCACCGGAGGCAGCAACGATCAGCA
GTTCCGTCTTCAACAAGTTGTAACGAACACTGCTCAACAAGTGCTCGATAGAGTGGCAGA
GAAAGTCGACGACACGGTAAACGCCCTTGAGATTTTGGTTGAAGATTCGGCTTCCAATGA
TTCCGTCATTACTGCTAAGAAACTTGTCAAGGATGCAAAGAATTCCAAACAGCTTTTATC
AGATATCTATGGCATTGGGATGGAGAAGTGCTCGGGTGACGAGAGCCCTCTAGTGTCCAA
GATCAGGGAAACTGCGAAAAACTTGAATAAAATCGTCGAAGAAAATATCACGAAAACAAT
TGAAAGTATGATGAAAACAGTGGAAGCTCAATGTCCTCATATATTTATGGATATAAGGGA
AGAGTTGGAAAGATCAATTGAAACAAAATGTCAACTCCCCAAAGATTCGGTGAAGGATTA
CGTGATGCATACTTCAGGGAGTGTTATTGTTAACCAAGTCAGTGAATTAAACTTATCAAT
GGCAACCTTGATGTCGGACAGGATCGCCGATAGATTGTTGGGAGCTTTGTCGCAAAGTAA
TCTTACATTGACGGATCAACTGAACAGACACAAACAGAAGGAGAATGTTGGGAAAAGAGC
AACAGAGGATGTTGTTCAAGTTGACGAGGATGGTGCGTTGCTCCCCGATATGAGGAGGAA
CAGGGCTGCAAGCATCGCGAAGAGGAAACAACGACCTGATGTCCAGTCTTCCCTCATGAC
AG
| Gene3D |
PH-like_dom_sf (IPR011993) - T[130-239] 9.3E-27 |
| PANTHER |
CARMIL1 (IPR029764) - T[137-993] 3.0E-234 |
| Gene3D |
LRR_dom_sf (IPR032675) - T[283-789] 1.2E-125 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[401-421] 0.03 - T[461-476] 0.025 - T[694-716] 0.022 |
| Pfam |
CARMIL_C (IPR031943) - T[908-1033] 3.8E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CARL1_HUMAN | 39.145 % | 626 | 0 |
| CARL3_HUMAN | 32.497 % | 490 | 2.52E-153 |
| CARL2_HUMAN | 30.147 % | 399 | 3.2E-119 |