- Transcript 'KH2012:KH.C11.39.v3....' >
- Transcript 'KH2012:KH.C11.39.v1....'
Transcript Model
Transcript Id
KH2012:KH.C11.39.v1.A.SL1-1
Possible name(s)
STRN; STRN3; STRN4
Gene model
Location
KhC11 [2,479,998 / 2,495,286]
Amino acid sequence
Length: 718
>KH.C11.39.v1.A.SL1-1
YNCFTMMEMDNGDSGGNQQNKPAETKSPYSMPGILHFIQHEWSRFEMERAQWDVERAELQ
ARIAFLQGERKGQENLKRDLIRRIKMLEFALKQERAKVHKLKFGTDISMEQKHNETNEES
KTNEMQTTNAHMSWRHGRQLLRQYLQEVGYSETILDVRSQRVRALLGNNYEVPKPTENDN
QVVNGDLSDEEVQQKSAGFVLASHGSGKSTENIFKDFNFLNAADNDEDEDVSMQEEDTTD
GGDQQRKSRAKDDFDEVDGFGDAEMALAEFDFLNPPDSEPDDMKLDWSVDQNKLNAMKEQ
FRQEKRQTKKKELKRPIKKDLQNMLDTLRGSELNRATEDVDIHIPDEENLPFTVGGTHIG
DESIENALGLGALAGLTVANEADPLSYDISATKESYRKTWNPKYTLRSHFDGIRAIRFLP
NESSVITASEDHTMKLWNLNKPLPSKKTQALDVEPIYSFRGHSGAVLSLEIDTEGSSCFS
GGLDSTVRVWSIPSVEIDAYDTYDPSVSQKILVGHTDAVWSLSYSGTRQQLLSASSDCSV
RLWNPTSADPLVQTYTTDGTPTSVCFVHCDSNHVVVSHTDGKVNLYDLETGQISLVLTEG
DGSSINCVVSHPTMPVTMTAHDDKHIKFYDNTSGKLIHSMVAHLDSVTSLSVDPNGLYLL
SGSHDSSIRLWNLDSKTCIQELTSHRKKFDESIYSVAFHPSATYIASAGADALAKVFV
Nucleotide sequence
Length: 3,340
>KH2012:KH.C11.39.v1.A.SL1-1
AAAACAACTAGAAAAATTGTAGCATAAATATTGATATTGAATTCTTAGGGAATTTGTTTC
CACTGTACTTGATACAACTGCTTTACAATGATGGAAATGGACAATGGAGATTCTGGTGGA
AATCAGCAAAATAAACCAGCCGAGACGAAGTCTCCATACTCGATGCCAGGCATTCTACAC
TTTATACAGCATGAATGGTCAAGGTTTGAAATGGAACGCGCACAATGGGACGTGGAGAGA
GCTGAGTTGCAGGCACGCATTGCGTTTCTGCAAGGTGAAAGAAAAGGGCAGGAGAATTTA
AAAAGAGATTTAATTCGAAGAATCAAAATGTTAGAATTTGCTCTAAAGCAAGAAAGAGCC
AAAGTGCACAAGCTCAAATTTGGAACAGACATTAGCATGGAACAAAAGCATAATGAGACT
AACGAGGAATCAAAAACGAATGAAATGCAAACAACAAACGCTCATATGTCGTGGCGTCAT
GGCAGGCAACTTCTGCGACAATACTTGCAAGAGGTTGGCTACAGCGAGACAATCCTGGAT
GTTCGGTCTCAAAGAGTCCGTGCTCTGCTCGGCAATAACTATGAGGTGCCGAAACCAACT
GAAAACGACAATCAAGTAGTAAATGGAGATCTATCAGATGAAGAAGTACAGCAAAAGTCA
GCAGGTTTTGTTTTAGCCAGTCACGGTTCAGGAAAATCAACTGAAAACATCTTTAAGGAT
TTTAACTTCCTAAACGCAGCAGACAACGATGAAGATGAAGATGTTAGCATGCAGGAAGAG
GACACAACAGATGGAGGGGATCAACAGCGAAAATCAAGAGCTAAAGATGACTTTGATGAG
GTGGATGGTTTCGGTGACGCAGAGATGGCTCTTGCTGAGTTTGACTTTCTTAATCCACCT
GACAGTGAACCAGATGATATGAAATTGGATTGGTCAGTTGATCAGAACAAACTAAATGCG
ATGAAGGAACAGTTTCGACAGGAGAAGAGACAGACAAAGAAAAAGGAACTAAAACGCCCT
ATAAAGAAAGATCTTCAAAATATGCTTGACACTCTACGTGGGTCTGAACTCAACCGTGCA
ACTGAGGATGTGGACATTCATATTCCAGATGAAGAAAACCTCCCCTTTACTGTAGGAGGG
ACACATATTGGAGATGAATCTATTGAAAACGCTCTCGGTCTTGGGGCCCTCGCTGGATTG
ACAGTCGCTAATGAAGCTGACCCTCTGTCTTACGATATCTCAGCCACCAAAGAATCGTAC
CGGAAGACATGGAATCCAAAATACACGCTCCGGAGTCACTTTGATGGCATCCGAGCGATC
AGGTTCCTCCCTAATGAGTCCTCCGTGATCACCGCATCTGAGGATCACACCATGAAGCTC
TGGAACCTCAATAAACCTCTTCCAAGCAAGAAGACACAAGCGTTGGATGTTGAACCTATC
TATAGCTTTAGAGGACACTCTGGTGCTGTTCTCAGCCTGGAAATTGATACTGAGGGGAGT
TCATGTTTTAGTGGAGGTTTAGATTCCACTGTTAGAGTATGGAGTATACCAAGTGTGGAA
ATAGACGCTTATGATACTTATGATCCATCCGTCTCCCAAAAGATCCTCGTCGGACACACG
GATGCGGTTTGGTCTCTCTCCTACTCCGGCACTCGTCAGCAATTATTGTCTGCATCATCT
GATTGTTCAGTGAGGTTGTGGAACCCAACATCAGCTGATCCTCTCGTGCAAACATACACT
ACTGATGGCACACCGACATCTGTCTGTTTCGTTCATTGCGACTCCAACCATGTAGTAGTA
TCCCACACTGATGGGAAAGTGAATTTGTACGATCTTGAAACTGGACAAATATCTCTCGTC
CTTACAGAGGGAGATGGAAGTAGCATCAACTGTGTTGTGAGCCATCCAACAATGCCTGTT
ACCATGACGGCACACGATGATAAACACATTAAATTCTATGACAACACATCAGGCAAACTA
ATTCACTCTATGGTGGCCCATCTGGATTCAGTGACCAGTTTATCTGTTGATCCTAATGGT
CTATACTTGTTGTCTGGAAGTCATGACAGTTCAATTCGTTTATGGAACCTGGATAGCAAG
ACCTGTATTCAGGAGCTTACTTCTCATAGGAAAAAGTTTGACGAATCAATTTACTCTGTG
GCATTCCATCCTAGTGCCACGTATATTGCGAGTGCAGGAGCGGATGCCTTGGCCAAGGTT
TTCGTTTAATATTCACGTGATTACTGCTCGTGAAGTAATTTTCGTGAAACAATGCTCATG
AAATCTTTTTCGTGAGACACTGCTCATGAAGTCACTTTCGTGAAACACTGCTCATGAAGT
CACTTTCGTGAAACACAGCTCATGAAGTATCTTTTGTGAGACCTTACGAAAAGACTCTAT
TTTCAGCGAGTGGTACTTTTTCACATAATTTCTGGCTCACGAACTTACATGATAAAGCAT
TTGATTGCAAGAATCACGTGATCATATTATTAGTTTGAGCTTTTGGGTAACCACCCCAAA
AATCATGTAAGGCTAGATTTGATATTTAACAGCTATGCTGTGTATTTTTAAGCGCATATG
GCAGCCTGCACCATTAATGCAGAGATTGGATTATCAACTCAAAACGTACACTGTTGTACC
CACATGCTAATAATGCAGTCTATAATTGTGCGCCCACATCGGTTTCCAACACCTGGTGAC
ATGTACTCAAAAATCCATGCGATTGTGAAATAATTCTCCTAAATTTGTACTTTTTGCACC
GATCGTTTTTTGGTGCGTTTTCAGTTTGACGGTGTAACAAACCTGTTGTTCGCGTTACAC
TACAGTGTTGTTTTCTCTTAGTTGGTTCAAAGAATTTTTTTGAAGCAGTTTCATAAAAGT
TCTGGTTTTACATGTACAATTCAAGTGGCAACAAAACTCGTTTTTTTTTCTCTGAAAGTG
ATTTTTCAAAAACGCTCCCCAATAATCAGTTAAATTAGCCTGGCTTTTTGTAGCCTCAGC
ATATATAAGGTTCTCAAATATATCCTTGCTTACATAGTTGGGAGTTGTTTAAATTTGATT
TGGCTGTATATCTGTTTTTAAATCTCACAAAAATTCATGGTTTTTCAACGTTTTCTACGT
TTTACAAAAAAAATCAGTTTCTGTCTGCAGTTATTTCAGGCCGAAAAGCATTTACTTTAT
TGAAACCTTTATATGTGCTTGCGTAATGTCATACTACTGCCGTTTTGCTGCATTGGTGTC
TAATGTAACAAGAAGAAATTTTATTTGGTCGTCAAAACCTTGCTGCACGGTTTTGAAGTA
TTAGTATTGTGGCTTTTGAGATAATAAATGGTATATGTCA
| Pfam |
Striatin_N (IPR013258) - T[31-155] 1.0E-43 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[398-717] 2.65E-67 |
| SMART |
WD40_repeat (IPR001680) - T[399-438] 7.9E-7 - T[452-491] 3.2E-7 - T[505-544] 5.7E-8 - T[548-587] 0.35 - T[590-630] 0.6 - T[633-672] 5.8E-10 - T[675-718] 1.6E-4 |
| Pfam |
WD40_repeat (IPR001680) - T[400-438] 7.6E-5 - T[454-491] 3.1E-4 - T[509-544] 5.8E-5 - T[634-672] 3.7E-8 - T[677-712] 0.0085 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[406-718] 47.141 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[406-440] 13.316 - T[459-492] 12.681 - T[512-553] 13.616 - T[640-681] 16.423 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[425-439] . - T[659-673] . |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[425-439] 2.7E-6 - T[478-492] 2.7E-6 - T[659-673] 2.7E-6 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[600-717] 3.5E-27 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| STRN3_HUMAN | 51.111 % | 722 | 0 |
| STRN_HUMAN | 50.667 % | 708 | 0 |
| STRN4_HUMAN | 45.267 % | 588 | 0 |