- Transcript 'KH2012:KH.C12.441.v1...' >
- Transcript 'KH2012:KH.C11.22.v3....' >
- Transcript 'KH2012:KH.C11.481.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.481.v1.A.ND1-1
Possible name(s)
IRF2; IRF4; IRF8
Gene model
Location
KhC11 [1,343,261 / 1,351,892]
Amino acid sequence
Length: 572
>KH.C11.481.v1.A.ND1-1
RPRVKPFMFKLKMYSPYSMCESFSSDRLKNSDNLQFKPWLIEQISSGNYPGLEWIDSEQQ
RVFKLPWTKKNYPGWEDHHKIFKAWAEHRSFIRNQKPPTQHVSLMKSNFRTILRKCRDLE
EQTNLHQLGLQTGNYKVYKVLTPEETAVKKGRTKGRQQTVQPDIEEEYGTDIVDVEILSD
DISNWIPDVHTIPDNWGAHKISNALNMGVIQNDRLGEKRGSSPSVSVEAKRKYPRLREQQ
QEEEVVAPQDSFTYHFTAPINGNKIVEDFIPKEVVFLPGATFSQPAPDDGLIPVDGMKVE
VHEEQLEEDKDADGFKMLLHAAEISAGPTRELHNKGNRDIYHLLDILGIPRDELRQYSLR
VKYQQHEVLERDLMEMNLGYRIHYGDPDQQCYLMKIDEPQRSELIVDFERPAISLPQVKT
IGGKGTNGFQKVLKNTDAGLVFTQDEDHNLFCKRLCQSRVFAFSRYGEDNDDKHPIKLER
EATVLLFNLNLFITDWINCLKTSRKREAIDHSIHLSLGKKPETRRCKTFIGLKLIPKVAE
TLLALLTTGNSDSVEVSVENQLDQVLRLFDID
Nucleotide sequence
Length: 2,135
>KH2012:KH.C11.481.v1.A.ND1-1
ATTGCGAGCAAGGTGACAGATACCTGACAAGATACGAATGAAACTACACCCATTACGAAA
CACCACCGGTTTGAAAGCCACTTATATCTTTCGTCCAGATTGTACTGATATTGATAATAA
TGGTGAGCAATTGCAAACAATTGAACGATCGAAACTTTTTAGCAAACTTTCGGAAGCAAT
TGTAGATCACCATCATGTTGCCGACCACCGCAGTGATAGCGAGAATCCATATTAATATAA
AGACCAAGAGTAAAGCCATTCATGTTTAAACTCAAAATGTACTCTCCTTATTCAATGTGT
GAAAGTTTTAGTTCTGATCGATTAAAAAACTCAGATAATCTTCAATTTAAACCTTGGCTG
ATCGAACAAATATCCAGTGGCAATTATCCTGGGTTGGAATGGATTGATTCCGAACAACAA
CGAGTGTTTAAACTTCCATGGACAAAGAAAAACTATCCTGGGTGGGAAGACCATCATAAA
ATATTCAAAGCTTGGGCAGAGCATCGCTCGTTCATTCGTAACCAAAAGCCACCAACTCAG
CATGTAAGTCTTATGAAAAGTAATTTCCGGACGATTCTTCGAAAATGTCGCGATCTTGAA
GAACAAACCAATCTCCATCAACTTGGTCTTCAAACTGGAAACTATAAAGTTTATAAAGTT
CTTACTCCTGAAGAAACTGCTGTTAAGAAAGGTAGGACAAAAGGAAGACAACAAACAGTT
CAACCTGATATAGAAGAGGAGTACGGAACAGATATTGTCGATGTGGAGATTTTGTCCGAT
GATATCTCAAATTGGATCCCAGATGTACACACCATACCTGATAACTGGGGTGCTCACAAA
ATTTCCAATGCTTTAAACATGGGAGTTATTCAAAATGATCGATTGGGGGAAAAACGTGGG
TCTTCCCCATCTGTGAGCGTGGAAGCCAAACGGAAATACCCCAGGTTAAGAGAGCAGCAG
CAAGAGGAAGAAGTGGTCGCACCACAGGACAGCTTCACTTATCATTTTACTGCTCCCATT
AATGGGAACAAAATTGTTGAGGATTTTATACCAAAAGAAGTCGTCTTTCTTCCCGGAGCA
ACATTCTCCCAACCTGCTCCAGATGATGGTTTGATTCCGGTGGATGGGATGAAGGTGGAG
GTTCATGAAGAGCAGTTGGAGGAGGACAAAGATGCAGATGGATTTAAAATGCTTCTTCAT
GCAGCGGAAATATCTGCAGGTCCAACCAGGGAGCTGCACAACAAAGGAAATCGAGATATT
TATCATTTGCTGGATATTCTTGGAATTCCACGTGATGAATTACGTCAATATTCGTTGAGA
GTCAAATACCAGCAACATGAAGTTCTTGAGCGTGACTTGATGGAGATGAATCTTGGTTAC
CGCATCCACTATGGTGATCCGGATCAACAATGTTACCTCATGAAGATTGATGAACCTCAG
AGGAGCGAACTGATCGTTGATTTCGAAAGACCAGCAATTTCCCTTCCACAAGTTAAAACT
ATCGGAGGAAAGGGGACCAATGGGTTCCAGAAAGTCCTAAAGAACACGGATGCGGGCCTT
GTCTTCACACAGGATGAGGATCACAACTTATTCTGCAAGCGACTCTGCCAGAGCAGAGTC
TTCGCTTTCTCGAGGTACGGGGAAGACAACGATGACAAACATCCGATCAAACTTGAACGG
GAAGCAACTGTCCTCCTTTTCAACTTAAACCTCTTCATCACTGATTGGATAAACTGCCTC
AAAACCTCCAGGAAGAGAGAAGCCATTGATCACTCCATCCACCTCAGTCTTGGGAAGAAA
CCAGAAACAAGAAGGTGCAAAACTTTTATCGGATTAAAACTCATTCCTAAAGTTGCAGAG
ACTTTGCTTGCTTTGTTGACGACCGGTAATTCTGACTCTGTTGAAGTGAGTGTTGAAAAC
CAGCTTGATCAAGTATTGCGGTTGTTTGATATTGATTAGATCGCACAAGTTGTATAATTG
AACATTATTGTGTTGCAACAATCACGGTTTAAAGAGAGGTTAATGATGTATTAACGAGTA
AGTTTATGATCAATTTAGTTACATGTGTAAATAGTTTCAATTCCATACATGGTTTATTTA
CAGTGATTATGGGAATACATTGTAAAAACAAAGTA
| PANTHER |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[21-570] 5.2E-118 |
| SMART |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[29-143] 1.2E-11 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[30-142] 1.9E-26 |
| ProSiteProfiles |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[33-142] 32.899 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[33-142] 7.8E-28 |
| Pfam |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[35-140] 4.8E-26 |
| PRINTS |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[35-54] 7.1E-7 - T[78-95] 7.1E-7 - T[102-124] 7.1E-7 |
| Gene3D |
SMAD-like_dom_sf (IPR017855) - T[349-547] 5.1E-33 |
| SUPERFAMILY |
SMAD_FHA_dom_sf (IPR008984) - T[353-563] 1.49E-28 |
| SMART |
Interferon_reg_factor-3 (IPR019471) - T[354-547] 6.1E-23 |
| Pfam |
Interferon_reg_factor-3 (IPR019471) - T[356-545] 3.9E-44 |
| Protein Name | Identity | Bit Score | e-value |
|---|