- Transcript 'KH2012:KH.C11.481.v2...'
Transcript Model
Transcript Id
KH2012:KH.C11.481.v2.A.SL2-1
Possible name(s)
IRF2; IRF4; IRF8
Gene model
Location
KhC11 [1,347,960 / 1,351,892]
Amino acid sequence
Length: 574
>KH.C11.481.v2.A.SL2-1
RNRPRVKPFMFKLKMYSPYSMCESFSSDRLKNSDNLQFKPWLIEQISSGNYPGLEWIDSE
QQRVFKLPWTKKNYPGWEDHHKIFKAWAEHRSFIRNQKPPTQHVSLMKSNFRTILRKCRD
LEEQTNLHQLGLQTGNYKVYKVLTPEETAVKKGRTKGRQQTVQPDIEEEYGTDIVDVEIL
SDDISNWIPDVHTIPDNWGAHKISNALNMGVIQNDRLGEKRGSSPSVSVEAKRKYPRLRE
QQQEEEVVAPQDSFTYHFTAPINGNKIVEDFIPKEVVFLPGATFSQPAPDDGLIPVDGMK
VEVHEEQLEEDKDADGFKMLLHAAEISAGPTRELHNKGNRDIYHLLDILGIPRDELRQYS
LRVKYQQHEVLERDLMEMNLGYRIHYGDPDQQCYLMKIDEPQRSELIVDFERPAISLPQV
KTIGGKGTNGFQKVLKNTDAGLVFTQDEDHNLFCKRLCQSRVFAFSRYGEDNDDKHPIKL
EREATVLLFNLNLFITDWINCLKTSRKREAIDHSIHLSLGKKPETRRCKTFIGLKLIPKV
AETLLALLTTGNSDSVEVSVENQLDQVLRLFDID
Nucleotide sequence
Length: 1,913
>KH2012:KH.C11.481.v2.A.SL2-1
ATTGAAATTTAGAGAAACAGACCAAGAGTAAAGCCATTCATGTTTAAACTCAAAATGTAC
TCTCCTTATTCAATGTGTGAAAGTTTTAGTTCTGATCGATTAAAAAACTCAGATAATCTT
CAATTTAAACCTTGGCTGATCGAACAAATATCCAGTGGCAATTATCCTGGGTTGGAATGG
ATTGATTCCGAACAACAACGAGTGTTTAAACTTCCATGGACAAAGAAAAACTATCCTGGG
TGGGAAGACCATCATAAAATATTCAAAGCTTGGGCAGAGCATCGCTCGTTCATTCGTAAC
CAAAAGCCACCAACTCAGCATGTAAGTCTTATGAAAAGTAATTTCCGGACGATTCTTCGA
AAATGTCGCGATCTTGAAGAACAAACCAATCTCCATCAACTTGGTCTTCAAACTGGAAAC
TATAAAGTTTATAAAGTTCTTACTCCTGAAGAAACTGCTGTTAAGAAAGGTAGGACAAAA
GGAAGACAACAAACAGTTCAACCTGATATAGAAGAGGAGTACGGAACAGATATTGTCGAT
GTGGAGATTTTGTCCGATGATATCTCAAATTGGATCCCAGATGTACACACCATACCTGAT
AACTGGGGTGCTCACAAAATTTCCAATGCTTTAAACATGGGAGTTATTCAAAATGATCGA
TTGGGGGAAAAACGTGGGTCTTCCCCATCTGTGAGCGTGGAAGCCAAACGGAAATACCCC
AGGTTAAGAGAGCAGCAGCAAGAGGAAGAAGTGGTCGCACCACAGGACAGCTTCACTTAT
CATTTTACTGCTCCCATTAATGGGAACAAAATTGTTGAGGATTTTATACCAAAAGAAGTC
GTCTTTCTTCCCGGAGCAACATTCTCCCAACCTGCTCCAGATGATGGTTTGATTCCGGTG
GATGGGATGAAGGTGGAGGTTCATGAAGAGCAGTTGGAGGAGGACAAAGATGCAGATGGA
TTTAAAATGCTTCTTCATGCAGCGGAAATATCTGCAGGTCCAACCAGGGAGCTGCACAAC
AAAGGAAATCGAGATATTTATCATTTGCTGGATATTCTTGGAATTCCACGTGATGAATTA
CGTCAATATTCGTTGAGAGTCAAATACCAGCAACATGAAGTTCTTGAGCGTGACTTGATG
GAGATGAATCTTGGTTACCGCATCCACTATGGTGATCCGGATCAACAATGTTACCTCATG
AAGATTGATGAACCTCAGAGGAGCGAACTGATCGTTGATTTCGAAAGACCAGCAATTTCC
CTTCCACAAGTTAAAACTATCGGAGGAAAGGGGACCAATGGGTTCCAGAAAGTCCTAAAG
AACACGGATGCGGGCCTTGTCTTCACACAGGATGAGGATCACAACTTATTCTGCAAGCGA
CTCTGCCAGAGCAGAGTCTTCGCTTTCTCGAGGTACGGGGAAGACAACGATGACAAACAT
CCGATCAAACTTGAACGGGAAGCAACTGTCCTCCTTTTCAACTTAAACCTCTTCATCACT
GATTGGATAAACTGCCTCAAAACCTCCAGGAAGAGAGAAGCCATTGATCACTCCATCCAC
CTCAGTCTTGGGAAGAAACCAGAAACAAGAAGGTGCAAAACTTTTATCGGATTAAAACTC
ATTCCTAAAGTTGCAGAGACTTTGCTTGCTTTGTTGACGACCGGTAATTCTGACTCTGTT
GAAGTGAGTGTTGAAAACCAGCTTGATCAAGTATTGCGGTTGTTTGATATTGATTAGATC
GCACAAGTTGTATAATTGAACATTATTGTGTTGCAACAATCACGGTTTAAAGAGAGGTTA
ATGATGTATTAACGAGTAAGTTTATGATCAATTTAGTTACATGTGTAAATAGTTTCAATT
CCATACATGGTTTATTTACAGTGATTATGGGAATACATTGTAAAAACAAAGTA
| PANTHER |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[23-572] 5.3E-118 |
| SMART |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[31-145] 1.2E-11 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[32-144] 1.9E-26 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[35-144] 7.8E-28 |
| ProSiteProfiles |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[35-144] 32.899 |
| Pfam |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[37-142] 4.9E-26 |
| PRINTS |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[37-56] 7.2E-7 - T[80-97] 7.2E-7 - T[104-126] 7.2E-7 |
| Gene3D |
SMAD-like_dom_sf (IPR017855) - T[351-549] 5.1E-33 |
| SUPERFAMILY |
SMAD_FHA_dom_sf (IPR008984) - T[355-565] 1.49E-28 |
| SMART |
Interferon_reg_factor-3 (IPR019471) - T[356-549] 6.1E-23 |
| Pfam |
Interferon_reg_factor-3 (IPR019471) - T[358-547] 3.9E-44 |
| Protein Name | Identity | Bit Score | e-value |
|---|