- Region 'REG00001220' >
- Transcript 'KH2012:KH.S696.1.v1....' >
- Transcript 'KH2012:KH.C6.184.v1....' >
- Transcript 'KH2012:KH.C11.485.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.485.v1.A.SL1-1
Possible name(s)
IRX3; IRX4; IRX6
Gene model
Location
KhC11 [1,407,928 / 1,411,982]
Amino acid sequence
Length: 583
>KH.C11.485.v1.A.SL1-1
FSAESRHGLSNLRMDARLVAARLPGFPMYQPPYATPTFPGYLHYNPAAAAAVAAATDPAA
FYPPIGPGENADAWRAGLSQAAAAAYYDPSMAAHYGGCYGYGPMGLSDGARRKNATRETT
STLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPRNRC
GEDDDEDDLADDAGNHGNTSRSSSPVGGAEDVDMRRGDFGRFEASGGDLSDGAFSDGRDE
RRAGKEEDRRKSPSSLVSRSLSNDESRSRLANGHFVKHGIHPYSNPRSSPASRPNISSPI
QARPGLPFPPNMPPMQAPSSQAPPHFHSSQFNPAAAASLIAASRGHPLPPHVMAALNEQA
QRHYQQALQHMPNYPFHGERALSTSTNASPSPSTSSRVSSTSPSTSLKPASSAETSTAST
PPKPKIWSIADVATSRDSSKDISNRSKICHKSHSLSPPSSQSDDKDMSNVRSWVGGMLHH
KLAAAMHPTNPQLMGLSPSSQGSKVPSNGARYPQSFPRFADIVAAQQEKANAAMREMGKP
HHSDDVIIMSERSPTIHETPIEALQARRNSSHSPVSPQQSDEH
Nucleotide sequence
Length: 2,211
>KH2012:KH.C11.485.v1.A.SL1-1
ATCTTGCAAGAAAGTTTGTTTCAAAAGTTTTTAAAGTCTTGTCAAATTGGAATATTTAAA
TCAAAGTTGGATTATTACGTCACAATCTGCTCAACAAACGTACGCAAGTCATCTCTTTAT
AACAAAGCTTTAATTTTCGGCGGAATCAAGACACGGTTTATCTAACTTAAGAATGGACGC
CCGACTCGTCGCGGCTCGTCTCCCCGGGTTTCCGATGTACCAACCCCCGTACGCCACCCC
AACTTTCCCGGGCTACCTGCATTACAACCCAGCAGCTGCAGCAGCAGTAGCAGCAGCAAC
AGACCCAGCTGCTTTCTATCCCCCAATCGGCCCGGGAGAAAACGCCGATGCTTGGCGGGC
AGGACTCAGTCAAGCTGCCGCGGCCGCTTACTACGATCCCTCGATGGCCGCACACTACGG
AGGATGCTATGGATATGGACCAATGGGTCTCAGCGACGGTGCTCGGCGTAAAAACGCAAC
CCGAGAAACAACATCGACGTTAAAAGCGTGGCTTAATGAACACAGAAAGAACCCTTACCC
AACTAAAGGGGAAAAGATCATGTTAGCTATTATTACCAAGATGACGCTTACACAGGTGTC
GACCTGGTTTGCAAACGCGCGTCGTCGTTTAAAGAAAGAAAACAAGATGACGTGGTCTCC
AAGGAACAGATGTGGGGAAGATGATGACGAGGATGATTTGGCAGATGATGCTGGTAACCA
TGGTAACACAAGTCGGTCATCCTCGCCAGTTGGTGGCGCTGAAGATGTGGACATGAGAAG
AGGAGATTTTGGGAGATTTGAAGCATCCGGAGGGGATTTATCAGACGGAGCGTTCTCGGA
TGGAAGGGATGAGAGAAGAGCAGGAAAAGAGGAGGACAGAAGAAAATCTCCTTCTAGTTT
AGTTTCGAGATCACTAAGCAACGACGAATCAAGAAGTCGTCTCGCCAACGGACATTTCGT
CAAACATGGAATCCACCCGTACTCAAACCCAAGGTCCTCCCCAGCCTCAAGACCCAATAT
ATCTTCACCCATCCAAGCTCGACCAGGATTACCCTTTCCCCCTAACATGCCCCCCATGCA
AGCCCCAAGCTCTCAAGCCCCGCCCCACTTTCACAGCTCCCAGTTCAACCCAGCAGCCGC
CGCCTCCCTTATAGCTGCATCACGTGGTCACCCCCTTCCTCCCCACGTCATGGCCGCACT
AAACGAGCAAGCACAGCGTCACTACCAGCAAGCATTACAACACATGCCCAACTATCCCTT
CCACGGAGAACGAGCTCTCTCCACCAGCACTAACGCGAGTCCATCACCCAGTACGTCATC
TAGGGTATCTTCTACGTCACCATCTACGTCATTAAAGCCAGCATCATCCGCTGAAACATC
AACTGCGTCAACCCCACCGAAGCCAAAAATCTGGTCGATCGCCGACGTCGCTACAAGTCG
CGATAGTTCTAAGGATATTTCCAACCGAAGCAAGATTTGTCACAAATCACACTCGCTTAG
CCCTCCTTCGTCACAGAGCGACGACAAAGATATGTCGAACGTTCGATCGTGGGTTGGAGG
TATGTTACATCACAAACTAGCAGCAGCCATGCACCCGACGAACCCACAACTAATGGGACT
TTCCCCTTCGTCCCAAGGATCAAAGGTCCCCTCCAACGGGGCAAGGTACCCCCAATCCTT
CCCACGATTTGCGGACATTGTCGCAGCGCAACAAGAGAAGGCAAACGCCGCAATGAGGGA
AATGGGAAAGCCCCACCATTCCGATGACGTTATTATTATGTCAGAAAGATCGCCCACTAT
TCATGAAACACCAATAGAAGCACTACAGGCGAGACGAAATTCGAGTCACTCGCCAGTTTC
ACCGCAACAGAGCGACGAACATTGAAGCTGTACATGGTGAAGTACAACGATGGCACGCGA
CCTGTTGAGATAAAGATGGAAGTTTGAAAGATGCTTGATACAAACCAGGCACACATGGAG
TTGCGAATGGGTGAAGCGGTTCGAGACCCTCCTCTGTTGTTTAAAAACGATACTGGTTTG
AGCATGTGATTATTACGTCAACAATGTACCAAGTTGCAATGACACCAGTTATAATGTTGA
GTGTTGTGGTATATATATATCATGATAACACACCGTGTTCTGTTTTGAAAAGTTCATTGA
GATTTTGTTCTTCTTTTCGTCCTAAGCACGTAATAAACTACGAAAGAAATA
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[106-169] 12.859 |
| SMART |
Homeobox_dom (IPR001356) - T[108-173] 1.7E-11 |
| CDD |
Homeobox_dom (IPR001356) - T[111-170] 1.40711E-13 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[111-176] 1.33E-17 |
| Pfam |
Homeobox_KN_domain (IPR008422) - T[126-165] 1.7E-15 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[144-167] . |
| SMART |
Iroquois_homeo (IPR003893) - T[419-436] 4.9E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| IRX6_HUMAN | 50.521 % | 168 | 2.8E-46 |
| IRX3_HUMAN | 80.46 % | 150 | 3.52E-39 |
| IRX4_HUMAN | 82.955 % | 154 | 1.47E-40 |