- Transcript 'Moocul.CG.ELv1_2.S37...' >
- Transcript 'KH2012:KH.S1035.3.v2...' >
- Clone 'ciad024p12' >
- Transcript 'KH2012:KH.C11.521.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.521.v1.A.SL1-1
Possible name(s)
DDX58; DICER1; FANCM
Gene model
Location
KhC11 [1,882,525 / 1,898,368]
Amino acid sequence
Length: 1,385
>KH.C11.521.v1.A.SL1-1
QTQFIVVLWKYQKSMDSFDKSAGNIWIYPTNYPVRDYQLSITKTALFKNTLVVLPTGLGK
TFIASVVMYNFYRWFPQGKIIFIAPTKPLVAQQSKACYDIMGIPADDQAEMTGSSMQVKK
RQDLWTNKRVFFLTPQLFNNDLASGTCPACDIKCVVFDEAHKAQGNYAYCQVIQKILVHS
KNFRVLALSATPGSNMFAVQQVITNLLISTTEIRSEDAIDVRQYTHTRTVEKVVVKLCDR
IMMFKEKYLAVIQVLINRLVSNDILYHKDAKNITKYALLMARDQFRKVSGLHKASMCIIE
GDFATAISLYHGLELLLQHGMKSFFIFLKGIMDGAKANLRTRNVLSANDQFQEIYQELTD
LFSSHNTNTYVQTHKEAYSDLSICYSHPKLRKLEEIVLTYFHNIQQCADTSNKSTETKVI
VFCQYRDSVQEVTDLLQQHEPLIRPIKFVGHAPTAKNESPCREGNKSKRFTQKDQLEAVA
RFCSGVYNTLIATCVGEEGLDIGAVDLIVCFDSHRSPIRLVQRMGRTGRKRNGKIVMLIT
EGKEERDYNSSVASRKSIGKAMHAGSKSLQYYPHNPPMIPHGIKPVCHKMFITVKKLPSN
TKKRKISTDSLNSYFKSTSKESTKSLFLSADEIMEWKRDFYIERDELSHIPKVSSNSACI
YLNKEFKKQEIAPKVMVDWLPWQCRLQTTKLVEHSGRTKLLHEMLTRNDSVITMETNDRE
KPTKQSEPIIISPTLDILPSKDNVRSPHKQNKNFGDIREIFSKVSKINSIKKIADIAKLF
TNHIDFPDRFIKSSNYLQNAVTDSKPQIICEKTVRLNHKDFDNGDKFEKFGLGLSKNIPQ
VSPVLVMEESNSVKTEKIILEEKHQELSTSPVTTHMNCPQTVNTTSAITTSSSCSFNLFL
SGTSGGKDCLDTNISNVNGKSLLPLVKNHAHCDSNTTLDSPDIETPDFGFPDIFALDLDP
PNELIEDNPAEKKPAVNKSLKRKSDCMVDSSCIIPETQEENIPPNKLDPPCKKLKESLKH
IKQMSFHELEQTFDVSADLFDPEFQVDFNLTTLVDCTSFTSSPVVSSAIPKHSVCNTSTE
RKAAGNITTDKKVLNGENYTRACQNWETTTDICDKMKNKVAEETFEDDESFLSALVKRKQ
RKAKCLESDESLNETGKAIYITSTDNISDTDSESFFHVKKEQTKFDHPRSVLPMNQSLFE
NKIQCNKQSTPKLLKFHGKVKPTVMQTKDHAKMFIDNEAEVSGDCDITEDDLSLTDEEML
AFVNDATQLTQHIDPTTEKSPDEKAMYLKSLHSSEWLKCKQNVEPRYRRNIEVFSQEVET
DYSNYLEDSFIVEHEDSNPPVDHGEITLLSQLPDYSAAKAKTRNQVKMLNVKKKKKRKLI
VDFDS
Nucleotide sequence
Length: 4,840
>KH2012:KH.C11.521.v1.A.SL1-1
TCACAGAACACCTAACAAACTCAATTTATAGTTGTTTTATGGAAATACCAAAAAAGTATG
GATAGTTTTGATAAATCTGCGGGAAATATTTGGATTTATCCGACCAACTATCCTGTACGT
GATTATCAACTTTCTATAACTAAGACTGCATTGTTTAAAAACACACTTGTTGTTTTACCA
ACTGGTCTTGGCAAAACTTTCATTGCTTCTGTTGTTATGTACAACTTTTACCGATGGTTT
CCACAAGGCAAGATTATTTTTATTGCACCGACAAAGCCACTGGTAGCTCAACAAAGCAAA
GCTTGTTATGACATTATGGGAATCCCTGCAGATGATCAAGCTGAAATGACAGGGTCTTCT
ATGCAAGTAAAAAAACGACAAGATTTGTGGACAAACAAGCGTGTATTCTTTCTTACACCT
CAACTATTCAATAATGACCTCGCCAGTGGGACATGTCCTGCTTGTGATATTAAATGTGTT
GTGTTTGATGAAGCACATAAAGCTCAAGGGAATTATGCATATTGTCAGGTTATTCAAAAA
ATTTTAGTTCATTCCAAAAACTTCAGAGTTCTTGCCTTGAGTGCCACACCAGGTTCAAAT
ATGTTTGCAGTTCAACAGGTCATTACAAATCTTTTAATATCTACAACCGAGATTCGTTCT
GAAGACGCAATAGATGTACGCCAATACACGCACACACGAACTGTGGAAAAAGTTGTTGTG
AAACTTTGTGATAGGATCATGATGTTCAAAGAAAAATATTTAGCTGTGATACAAGTTTTA
ATCAATCGCCTTGTTTCAAATGACATTCTTTACCATAAAGATGCAAAAAACATTACAAAA
TATGCGCTGCTAATGGCAAGAGATCAATTTCGGAAAGTTTCTGGTTTGCATAAAGCGTCT
ATGTGTATTATCGAGGGGGATTTTGCGACTGCTATCTCTCTTTACCATGGTCTTGAACTA
CTTCTTCAACATGGAATGAAATCTTTTTTTATATTTTTGAAAGGAATAATGGATGGTGCA
AAAGCCAACTTGAGAACTAGAAATGTTTTGTCCGCTAATGACCAATTTCAGGAAATCTAT
CAGGAGTTGACCGACTTGTTTTCATCACACAACACAAACACTTATGTGCAAACGCACAAA
GAAGCATATTCTGACTTATCTATATGCTACAGTCATCCGAAATTAAGGAAATTAGAAGAA
ATAGTTTTAACATACTTTCACAATATACAGCAATGTGCAGATACTTCAAACAAATCAACT
GAAACCAAAGTTATTGTGTTCTGTCAATATCGTGACAGTGTACAAGAAGTAACAGATCTT
CTTCAACAACATGAACCGCTTATTCGTCCGATTAAATTTGTTGGTCATGCCCCAACAGCA
AAAAACGAAAGTCCTTGTAGAGAGGGAAACAAAAGTAAAAGATTTACTCAAAAAGATCAA
CTAGAGGCTGTTGCTCGATTTTGTTCGGGTGTTTACAACACGTTGATCGCAACATGTGTT
GGAGAGGAAGGGTTGGACATCGGGGCAGTTGATCTCATTGTGTGTTTCGACTCCCACAGA
AGTCCGATCCGCCTCGTGCAGAGGATGGGAAGAACTGGGAGGAAAAGAAACGGAAAGATT
GTGATGTTAATCACTGAAGGGAAGGAAGAAAGAGATTACAACTCAAGCGTAGCAAGTCGA
AAATCGATTGGCAAAGCAATGCACGCTGGTAGTAAATCATTGCAATATTACCCACATAAT
CCACCTATGATACCACATGGTATTAAACCTGTTTGTCACAAAATGTTTATAACTGTTAAA
AAGTTGCCTTCCAATACAAAAAAGAGAAAAATATCGACCGATTCTCTTAATTCCTACTTC
AAAAGTACATCAAAAGAATCAACCAAGTCCTTGTTTCTGTCTGCTGATGAGATAATGGAG
TGGAAAAGAGATTTTTATATTGAGAGAGATGAATTATCACATATTCCGAAAGTATCTTCC
AACTCAGCATGCATTTATTTAAATAAAGAGTTTAAGAAACAAGAAATTGCTCCAAAAGTT
ATGGTGGATTGGTTACCATGGCAATGTAGACTCCAAACAACTAAGCTTGTGGAACATTCT
GGAAGGACCAAACTTTTGCATGAGATGTTAACAAGAAATGATTCAGTCATTACAATGGAA
ACAAATGATAGAGAAAAACCAACAAAACAATCTGAACCAATTATTATTTCACCAACACTA
GATATTTTACCATCAAAAGACAATGTTCGGTCTCCACACAAACAGAACAAAAACTTTGGC
GACATAAGAGAAATATTTTCAAAAGTATCAAAAATAAACTCAATCAAGAAAATCGCAGAT
ATAGCAAAACTTTTTACAAATCACATTGATTTTCCTGATCGGTTTATAAAGAGCTCAAAT
TATCTCCAAAATGCTGTCACTGACTCAAAACCACAAATTATCTGTGAAAAAACTGTTCGT
TTAAACCATAAAGATTTTGATAATGGTGACAAGTTTGAAAAATTTGGTTTGGGTTTGTCT
AAAAATATCCCACAAGTCTCTCCAGTGTTAGTTATGGAGGAAAGTAATTCTGTAAAAACT
GAGAAAATTATTTTGGAGGAAAAACATCAAGAGTTAAGTACTTCTCCAGTTACAACGCAT
ATGAACTGCCCACAAACTGTTAATACTACTTCTGCCATCACCACTTCAAGCTCATGTAGT
TTTAATTTGTTTTTAAGTGGTACTAGTGGTGGAAAAGATTGCTTAGATACCAATATTTCA
AATGTTAATGGTAAGAGTTTGCTGCCATTGGTGAAGAATCATGCGCACTGTGACAGCAAT
ACAACACTGGATAGTCCTGATATAGAAACTCCTGATTTTGGTTTTCCTGATATATTTGCT
CTTGATCTGGACCCCCCTAATGAATTAATTGAGGACAACCCTGCAGAAAAGAAACCAGCA
GTAAACAAATCTCTGAAACGAAAATCTGACTGCATGGTGGATTCCTCATGTATCATTCCA
GAAACACAAGAGGAGAATATTCCACCCAACAAGCTGGACCCTCCCTGTAAGAAACTTAAA
GAATCACTAAAACATATAAAACAGATGTCCTTCCATGAACTTGAACAAACGTTTGATGTG
TCTGCTGATCTATTTGACCCAGAATTTCAAGTTGATTTTAATTTGACCACATTAGTTGAC
TGTACTTCTTTTACGTCAAGCCCGGTGGTCAGTAGTGCGATACCAAAACACTCGGTGTGC
AACACATCTACAGAGAGAAAAGCTGCGGGAAATATTACGACCGATAAAAAAGTTTTAAAT
GGGGAAAATTATACAAGAGCTTGTCAGAATTGGGAAACAACTACGGATATTTGTGATAAA
ATGAAAAACAAAGTTGCAGAAGAAACATTTGAAGATGATGAGTCATTTTTATCTGCGTTG
GTTAAAAGAAAACAACGGAAAGCAAAATGTCTTGAATCTGATGAATCCTTGAATGAAACT
GGGAAAGCAATCTATATAACCTCAACTGACAATATATCAGATACAGATTCAGAAAGTTTT
TTTCATGTTAAAAAGGAGCAAACAAAATTTGATCATCCCAGGTCAGTGTTACCAATGAAT
CAAAGCTTGTTTGAAAATAAAATTCAATGCAACAAACAATCAACTCCAAAACTGCTAAAG
TTTCACGGAAAAGTTAAACCAACTGTGATGCAAACTAAAGATCATGCAAAGATGTTTATC
GACAATGAAGCGGAAGTAAGTGGTGATTGTGACATCACAGAAGATGATCTATCACTCACA
GATGAAGAAATGTTGGCTTTTGTAAATGACGCAACGCAACTGACTCAACACATCGATCCA
ACCACTGAGAAATCACCCGATGAGAAGGCAATGTATCTTAAATCTCTACATTCAAGTGAG
TGGCTGAAATGCAAGCAAAATGTTGAACCACGCTACAGACGAAATATTGAGGTTTTTTCC
CAGGAGGTGGAAACAGATTATTCTAATTATTTGGAAGATAGTTTTATCGTGGAGCACGAA
GATTCAAACCCTCCTGTTGACCACGGTGAAATAACTCTCTTATCTCAATTACCAGATTAC
TCTGCTGCGAAAGCAAAGACACGAAATCAGGTTAAGATGCTGAATGTGAAAAAGAAAAAA
AAGAGAAAGCTCATCGTTGATTTTGATTCTTGAGTCAATCCTACACCTGTTCGGATAATA
AGTTTTAGTTCACACAGTTGGCATAAGAGTACTTAAGTCGTTTTTGCTCTTTTTTCTGTA
TAAGTGTGCCTAAGGCTGAAAACCAAATTGTTCTTTTTTGTCTTGTGAACTTTCTACTTA
TCTTTTGTGTTTGTGGTTTCAGTTTATTCTTTTTATCACTTACCGAACATTAATCTGCTG
TATGTCTTGCCGGTACAAGAACTCATAATGGGTTGCATATAACCTATGCTACAGGTTGGG
CATATATGGGCAGCCCTGGCTTATGCAAACAAAGTGAAATTTAAACGGTGGGGTTGAGTG
GTTAGTCGTATCTGATTTCTATCTCACTCTCTAAACTCTTGTTTTCGTCTTAACAATTTT
CAGATGTGGCACGTACTCAAATATTGTGTGTAATGTGTATGTGGCAACGTCTGAAATGGC
AAAGTTGTGTTTTTTAATAATAGTTTGTATTTATTGATTTTGAACTCTATATTTATTATT
GGAAGAAATGACTATGTGTACTACCTCAAAAGTGTTACACAGTACCTTTTTTTACTTCGT
TTTTTTCACATCATTATTTGCAATATAGATTATATTCCAATAAATCTTCATTACAAAATG
TTTTTGCTGACAAAAAACAAAACTTATGAAAAGACAAAAA
| SMART |
Helicase_ATP-bd (IPR014001) - T[30-224] 5.5E-26 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[41-210] 21.757 |
| Pfam |
Helicase/UvrB_N (IPR006935) - T[46-192] 6.1E-20 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[77-230] 8.01E-44 - T[389-545] 8.01E-44 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[403-570] 16.429 |
| Pfam |
Helicase_C (IPR001650) - T[411-530] 1.8E-17 |
| CDD |
Helicase_C (IPR001650) - T[418-538] 2.24673E-19 |
| SMART |
Helicase_C (IPR001650) - T[430-531] 4.9E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FANCM_HUMAN | 48.784 % | 684 | 0 |