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TRANSCRIPT CARD

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  1. Clone 'ciad067d05' > 
  2. Transcript 'KH2012:KH.C13.16.v1....' > 
  3. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  4. Transcript 'KH2012:KH.C14.240.v2...' > 
  5. Transcript 'KH2012:KH.C11.533.v1...'

Transcript Model

Transcript Id

KH2012:KH.C11.533.v1.A.nonSL3-1

Possible name(s)

CIRBP; RBM3; RBM38

Gene model

KH2012:KH.C11.533

Location

KhC11 [4,078,267 / 4,079,466]

Sequences

Amino acid sequence

Length: 147

>KH.C11.533.v1.A.nonSL3-1
CDRETGRSRGFAFVTFSSEGEANDAIENLNESDVAGRNVSVRQAQSKRDGGGGGRGGGGY
GGGGYGGGGGSAVATEVVVAAEVDTAAVVVMEAVAEDTMMTVAVMEEVTMVADEVEAEEE
VTDIKQILAESYDLPTCSNYLLCLNYF

Nucleotide sequence

Length: 518

>KH2012:KH.C11.533.v1.A.nonSL3-1
TTGTGATCGTGAAACTGGCCGGTCCCGTGGTTTTGCTTTTGTTACGTTTTCCTCTGAAGG
AGAAGCTAATGACGCCATTGAAAATTTAAACGAGTCCGATGTCGCTGGACGTAATGTCTC
CGTGAGGCAAGCGCAATCAAAACGTGATGGTGGCGGCGGAGGTCGTGGAGGTGGAGGTTA
TGGGGGTGGTGGCTACGGAGGTGGCGGTGGCTCGGCGGTGGCTACGGAGGTGGTGGTGGC
GGCGGAGGTAGATACGGCGGCAGTAGTGGTTATGGAGGCGGTGGCCGAAGATACAATGAT
GACCGTGGCAGTTATGGAGGAGGTGACTATGGTGGCGGACGAAGTGGAGGCGGAGGAAGA
AGTGACCGATATTAAACAGATCCTGGCTGAGAGTTATGATCTGCCAACATGCAGCAACTA
CCTGCTGTGTTTGAACTATTTCTAACATGCTCCGCTCCCAGTTAATCTGGAATCGATTTT
ATTCTTTCATCGAATAAACTACAAATGTACATAATGAA

InterProScan

Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[1-74] 7.2E-16
ProSiteProfiles
RRM_dom (IPR000504) - T[1-46] 11.878
Pfam
RRM_dom (IPR000504) - T[2-39] 3.2E-9
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[2-71] 7.06E-18

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value