- Transcript 'KH2012:KH.C11.533.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.533.v1.A.SL1-1
Possible name(s)
CIRBP; RBM3; RBM38
Gene model
Location
KhC11 [4,078,267 / 4,079,597]
Amino acid sequence
Length: 191
>KH.C11.533.v1.A.SL1-1
IVFSNYQNMANCKVFVGNLSYNATEDDLRKHFSGSGQVEEVAIICDRETGRSRGFAFVTF
SSEGEANDAIENLNESDVAGRNVSVRQAQSKRDGGGGGRGGGGYGGGGYGGGGGSAVATE
VVVAAEVDTAAVVVMEAVAEDTMMTVAVMEEVTMVADEVEAEEEVTDIKQILAESYDLPT
CSNYLLCLNYF
Nucleotide sequence
Length: 649
>KH2012:KH.C11.533.v1.A.SL1-1
ATTGTTTTTTCAAATTACCAAAACATGGCAAATTGTAAAGTTTTTGTTGGTAATCTATCG
TACAATGCTACTGAAGATGACTTGAGGAAACATTTCAGTGGAAGCGGGCAAGTTGAAGAA
GTCGCCATAATTTGTGATCGTGAAACTGGCCGGTCCCGTGGTTTTGCTTTTGTTACGTTT
TCCTCTGAAGGAGAAGCTAATGACGCCATTGAAAATTTAAACGAGTCCGATGTCGCTGGA
CGTAATGTCTCCGTGAGGCAAGCGCAATCAAAACGTGATGGTGGCGGCGGAGGTCGTGGA
GGTGGAGGTTATGGGGGTGGTGGCTACGGAGGTGGCGGTGGCTCGGCGGTGGCTACGGAG
GTGGTGGTGGCGGCGGAGGTAGATACGGCGGCAGTAGTGGTTATGGAGGCGGTGGCCGAA
GATACAATGATGACCGTGGCAGTTATGGAGGAGGTGACTATGGTGGCGGACGAAGTGGAG
GCGGAGGAAGAAGTGACCGATATTAAACAGATCCTGGCTGAGAGTTATGATCTGCCAACA
TGCAGCAACTACCTGCTGTGTTTGAACTATTTCTAACATGCTCCGCTCCCAGTTAATCTG
GAATCGATTTTATTCTTTCATCGAATAAACTACAAATGTACATAATGAA
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[4-117] 1.4E-33 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[8-115] 8.19E-36 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[12-90] 20.628 |
| SMART |
RRM_dom_euk (IPR003954) - T[13-86] 9.7E-4 |
| SMART |
RRM_dom (IPR000504) - T[13-86] 1.5E-28 |
| Pfam |
RRM_dom (IPR000504) - T[14-83] 1.6E-23 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CIRBP_HUMAN | 48.684 % | 72.4 | 3.23E-16 |