- Transcript 'KH2012:KH.S437.6.v1....' >
- Transcript 'KH2012:KH.C11.533.v2...'
Transcript Model
Transcript Id
KH2012:KH.C11.533.v2.A.SL1-1
Possible name(s)
CIRBP; RBM3; RBM38
Gene model
Location
KhC11 [4,078,267 / 4,079,597]
Amino acid sequence
Length: 159
>KH.C11.533.v2.A.SL1-1
IVFSNYQNMANCKVFVGNLSYNATEDDLRKHFSGSGQVEEVAIICDRETGRSRGFAFVTF
SSEGEANDAIENLNESDVAGRNVSVRQAQSKRDGGGGGRGGGGYGGGGYGGGGGGGGGRY
GGSSGYGGGGRRYNDDRGSYGGGDYGGGRSGGGGRSDRY
Nucleotide sequence
Length: 623
>KH2012:KH.C11.533.v2.A.SL1-1
ATTGTTTTTTCAAATTACCAAAACATGGCAAATTGTAAAGTTTTTGTTGGTAATCTATCG
TACAATGCTACTGAAGATGACTTGAGGAAACATTTCAGTGGAAGCGGGCAAGTTGAAGAA
GTCGCCATAATTTGTGATCGTGAAACTGGCCGGTCCCGTGGTTTTGCTTTTGTTACGTTT
TCCTCTGAAGGAGAAGCTAATGACGCCATTGAAAATTTAAACGAGTCCGATGTCGCTGGA
CGTAATGTCTCCGTGAGGCAAGCGCAATCAAAACGTGATGGTGGCGGCGGAGGTCGTGGA
GGTGGAGGTTATGGGGGTGGTGGCTACGGAGGTGGTGGTGGTGGCGGCGGAGGTAGATAC
GGCGGCAGTAGTGGTTATGGAGGCGGTGGCCGAAGATACAATGATGACCGTGGCAGTTAT
GGAGGAGGTGACTATGGTGGCGGACGAAGTGGAGGCGGAGGAAGAAGTGACCGATATTAA
ACAGATCCTGGCTGAGAGTTATGATCTGCCAACATGCAGCAACTACCTGCTGTGTTTGAA
CTATTTCTAACATGCTCCGCTCCCAGTTAATCTGGAATCGATTTTATTCTTTCATCGAAT
AAACTACAAATGTACATAATGAA
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[4-108] 2.0E-32 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[8-122] 9.54E-37 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[12-90] 20.628 |
| SMART |
RRM_dom_euk (IPR003954) - T[13-86] 9.7E-4 |
| SMART |
RRM_dom (IPR000504) - T[13-86] 1.5E-28 |
| Pfam |
RRM_dom (IPR000504) - T[14-83] 1.1E-23 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CIRBP_HUMAN | 45.27 % | 76.6 | 2.82E-18 |
| RBM3_HUMAN | 43.421 % | 70.9 | 3.2E-16 |