Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Phmamm.CG.MTP2014.S9...' > 
  2. Transcript 'NCBI:KH.XM_009863660...' > 
  3. Transcript 'KH2012:KH.C11.533.v2...'

Transcript Model

Transcript Id

KH2012:KH.C11.533.v2.A.SL2-1

Possible name(s)

CIRBP; RBM3; RBM38

Gene model

KH2012:KH.C11.533

Location

KhC11 [4,078,267 / 4,079,499]

Sequences

Amino acid sequence

Length: 126

>KH.C11.533.v2.A.SL2-1
GSGQVEEVAIICDRETGRSRGFAFVTFSSEGEANDAIENLNESDVAGRNVSVRQAQSKRD
GGGGGRGGGGYGGGGYGGGGGGGGGRYGGSSGYGGGGRRYNDDRGSYGGGDYGGGRSGGG
GRSDRY

Nucleotide sequence

Length: 525

>KH2012:KH.C11.533.v2.A.SL2-1
TGGAAGCGGGCAAGTTGAAGAAGTCGCCATAATTTGTGATCGTGAAACTGGCCGGTCCCG
TGGTTTTGCTTTTGTTACGTTTTCCTCTGAAGGAGAAGCTAATGACGCCATTGAAAATTT
AAACGAGTCCGATGTCGCTGGACGTAATGTCTCCGTGAGGCAAGCGCAATCAAAACGTGA
TGGTGGCGGCGGAGGTCGTGGAGGTGGAGGTTATGGGGGTGGTGGCTACGGAGGTGGTGG
TGGTGGCGGCGGAGGTAGATACGGCGGCAGTAGTGGTTATGGAGGCGGTGGCCGAAGATA
CAATGATGACCGTGGCAGTTATGGAGGAGGTGACTATGGTGGCGGACGAAGTGGAGGCGG
AGGAAGAAGTGACCGATATTAAACAGATCCTGGCTGAGAGTTATGATCTGCCAACATGCA
GCAACTACCTGCTGTGTTTGAACTATTTCTAACATGCTCCGCTCCCAGTTAATCTGGAAT
CGATTTTATTCTTTCATCGAATAAACTACAAATGTACATAATGAA

InterProScan

ProSiteProfiles
RRM_dom (IPR000504) - T[1-57] 13.857
Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[1-76] 1.1E-18
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[3-85] 8.14E-18
Pfam
RRM_dom (IPR000504) - T[3-50] 1.3E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value