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TRANSCRIPT CARD

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  1. Clone 'cinc006d08'
  2. Transcript 'Moocul.CG.ELv1_2.S11...'
  3. Transcript 'KH2012:KH.C11.535.v1...'

Transcript Model

Transcript Id

KH2012:KH.C11.535.v1.A.nonSL10-1

Possible name(s)

DPF1; DPF2; DPF3

Location

KhC11 [4,350,686 / 4,355,774]

Sequences

Amino acid sequence

Length: 401

>KH.C11.535.v1.A.nonSL10-1
VDMSGNDGFYKEALEHCRTFNSRLMTERRVRLPYLDSQTRVAQSDCCLWFKRRHRGPGLK
PNQVYCYPSKRWKKRPRFTPLVDPSYEAMAAANDYKSMLRSSDVPHHLINENSNDSSSMN
TITSAMIDADNEMLDNVSNNEDNGAIDEDEDFEDFENGKSKKKGRKSQFKAATRSGRKSD
VTTDDKYHTCDYCGKKYKNKTGLNYHVQHVHQDELDADEEYTPSGRHSPSSIMSDDHHST
SSRTSAIAAQKAVAAAVADISEVEIIEPRPKRKRQTQSNNYCDFCLGDADENKKTGESEE
LVSCSDCGRSGHPTCLQFTDIMTMNVKKYSWQCIECKSCHVCGTSDNDEQLLFCDDCDRG
YHMYCLQPRMENPPEGSWICNLCENDRKEREKLASHGTLSL

Nucleotide sequence

Length: 1,691

>KH2012:KH.C11.535.v1.A.nonSL10-1
ACATTGTACGTTTAACTGTAAGTAGACATGTCGGGAAACGATGGGTTCTATAAAGAAGCG
TTGGAACATTGTCGCACGTTCAATAGTCGGCTGATGACAGAACGAAGGGTTCGATTGCCT
TACCTAGATTCCCAAACAAGAGTCGCACAAAGTGATTGCTGCCTTTGGTTCAAAAGAAGA
CATCGTGGACCTGGTTTAAAACCAAACCAAGTATATTGCTACCCCAGCAAAAGATGGAAG
AAACGACCCCGTTTCACCCCGCTGGTGGACCCCTCGTATGAAGCAATGGCTGCTGCAAAC
GATTACAAAAGTATGCTGAGATCCTCTGATGTCCCTCATCATCTGATCAATGAAAACTCG
AACGATTCAAGCAGCATGAACACGATAACTTCTGCGATGATCGACGCCGACAACGAAATG
CTCGATAACGTTTCAAACAACGAGGATAACGGGGCTATCGACGAGGACGAAGATTTCGAA
GATTTTGAAAACGGGAAGTCAAAGAAAAAGGGAAGGAAAAGTCAATTTAAGGCGGCCACA
AGATCTGGTAGAAAGAGCGACGTCACTACTGATGATAAATATCATACATGTGATTACTGT
GGAAAGAAATACAAGAACAAGACTGGGTTAAACTACCACGTCCAGCATGTGCATCAAGAT
GAACTCGATGCAGATGAGGAATATACTCCAAGTGGAAGACACTCACCATCCTCCATTATG
TCCGATGATCATCATTCAACCTCATCAAGAACTTCTGCCATCGCTGCTCAGAAAGCTGTG
GCAGCAGCAGTTGCTGATATAAGTGAGGTTGAAATCATCGAACCACGACCAAAACGTAAA
CGACAAACTCAGTCGAACAATTATTGCGATTTCTGTCTCGGAGATGCAGATGAGAATAAA
AAGACGGGAGAATCTGAGGAGTTGGTTTCGTGTTCTGATTGTGGGAGATCTGGCCATCCT
ACGTGTTTACAGTTCACTGATATAATGACAATGAATGTAAAGAAATACAGCTGGCAATGC
ATTGAATGCAAGTCATGTCATGTGTGTGGAACATCTGATAACGATGAGCAGTTATTGTTC
TGTGATGACTGCGATAGAGGATACCACATGTATTGCCTTCAACCCCGAATGGAAAATCCT
CCAGAGGGAAGCTGGATTTGTAATCTTTGTGAAAACGATAGAAAAGAACGAGAAAAACTG
GCAAGTCATGGGACACTAAGTTTGTGAGTTAGCGGCTCATTTACATTGTTTGTTGCTGAG
GAAATGACATCACTGCCTGTTATACCAACCATGGGCAGATATCTTTTGTAAAATCAGATG
TTTAGGCCAAAACACGCATGTTATTATTTTAAATTGATGCAGTATCCCCACCACCTTTAC
TATGTGGTCCATGAGCTACTCCAACGCATATCCATATTAGGGGCCCATGATACCCACATA
ATATTAAGTGGTAAGCAGTTCAAATGGTCCAAGATAGCAAGTTACCAATCCCTATTCCAC
TTTTCCATAAACTAATGGAATTATAAGGTGATTAGTTGCACACTTGTAAAAATTTAATCA
AACATATTGCTGAAAAGTTTTGCCACCAAGATTGCAATCATATTATTATAAAAATGCTAT
GTAACTACAGACAACAGTCACAGATACTACATGGACCATTCTGTTTGTAAATAAAACATT
TTTTTCCAAAA

InterProScan

Pfam
Requiem/DPF_N_dom (IPR025750) - T[6-76] 8.0E-33
SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[188-212] 2.43E-5
ProSiteProfiles
Znf_C2H2_type (IPR013087) - T[188-216] 10.783
SMART
Znf_C2H2_type (IPR013087) - T[188-211] 0.0047
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[190-211] .
SUPERFAMILY
Znf_FYVE_PHD (IPR011011) - T[274-338] 2.44E-6 - T[322-390] 8.42E-19
Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[278-397] 3.1E-38
ProSiteProfiles
Znf_PHD-finger (IPR019787) - T[279-339] 9.81 - T[336-386] 11.083
SMART
Znf_PHD (IPR001965) - T[281-337] 4.2E-9 - T[338-384] 4.7E-13
Pfam
Znf_PHD-finger (IPR019787) - T[339-385] 2.0E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
REQU_HUMAN 39.713 % 277 3.04E-90
DPF3_HUMAN 42.172 % 305 3.03E-101
DPF1_HUMAN 61.364 % 167 5.54E-48