- Transcript 'KH2012:KH.C11.535.v1...' >
- Transcript 'KH2012:KH.C11.535.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.535.v1.A.nonSL6-1
Possible name(s)
DPF1; DPF2; DPF3
Gene model
Location
KhC11 [4,350,686 / 4,355,761]
Amino acid sequence
Length: 401
>KH.C11.535.v1.A.nonSL6-1
VDMSGNDGFYKEALEHCRTFNSRLMTERRVRLPYLDSQTRVAQSDCCLWFKRRHRGPGLK
PNQVYCYPSKRWKKRPRFTPLVDPSYEAMAAANDYKSMLRSSDVPHHLINENSNDSSSMN
TITSAMIDADNEMLDNVSNNEDNGAIDEDEDFEDFENGKSKKKGRKSQFKAATRSGRKSD
VTTDDKYHTCDYCGKKYKNKTGLNYHVQHVHQDELDADEEYTPSGRHSPSSIMSDDHHST
SSRTSAIAAQKAVAAAVADISEVEIIEPRPKRKRQTQSNNYCDFCLGDADENKKTGESEE
LVSCSDCGRSGHPTCLQFTDIMTMNVKKYSWQCIECKSCHVCGTSDNDEQLLFCDDCDRG
YHMYCLQPRMENPPEGSWICNLCENDRKEREKLASHGTLSL
Nucleotide sequence
Length: 1,678
>KH2012:KH.C11.535.v1.A.nonSL6-1
AACTGTAAGTAGACATGTCGGGAAACGATGGGTTCTATAAAGAAGCGTTGGAACATTGTC
GCACGTTCAATAGTCGGCTGATGACAGAACGAAGGGTTCGATTGCCTTACCTAGATTCCC
AAACAAGAGTCGCACAAAGTGATTGCTGCCTTTGGTTCAAAAGAAGACATCGTGGACCTG
GTTTAAAACCAAACCAAGTATATTGCTACCCCAGCAAAAGATGGAAGAAACGACCCCGTT
TCACCCCGCTGGTGGACCCCTCGTATGAAGCAATGGCTGCTGCAAACGATTACAAAAGTA
TGCTGAGATCCTCTGATGTCCCTCATCATCTGATCAATGAAAACTCGAACGATTCAAGCA
GCATGAACACGATAACTTCTGCGATGATCGACGCCGACAACGAAATGCTCGATAACGTTT
CAAACAACGAGGATAACGGGGCTATCGACGAGGACGAAGATTTCGAAGATTTTGAAAACG
GGAAGTCAAAGAAAAAGGGAAGGAAAAGTCAATTTAAGGCGGCCACAAGATCTGGTAGAA
AGAGCGACGTCACTACTGATGATAAATATCATACATGTGATTACTGTGGAAAGAAATACA
AGAACAAGACTGGGTTAAACTACCACGTCCAGCATGTGCATCAAGATGAACTCGATGCAG
ATGAGGAATATACTCCAAGTGGAAGACACTCACCATCCTCCATTATGTCCGATGATCATC
ATTCAACCTCATCAAGAACTTCTGCCATCGCTGCTCAGAAAGCTGTGGCAGCAGCAGTTG
CTGATATAAGTGAGGTTGAAATCATCGAACCACGACCAAAACGTAAACGACAAACTCAGT
CGAACAATTATTGCGATTTCTGTCTCGGAGATGCAGATGAGAATAAAAAGACGGGAGAAT
CTGAGGAGTTGGTTTCGTGTTCTGATTGTGGGAGATCTGGCCATCCTACGTGTTTACAGT
TCACTGATATAATGACAATGAATGTAAAGAAATACAGCTGGCAATGCATTGAATGCAAGT
CATGTCATGTGTGTGGAACATCTGATAACGATGAGCAGTTATTGTTCTGTGATGACTGCG
ATAGAGGATACCACATGTATTGCCTTCAACCCCGAATGGAAAATCCTCCAGAGGGAAGCT
GGATTTGTAATCTTTGTGAAAACGATAGAAAAGAACGAGAAAAACTGGCAAGTCATGGGA
CACTAAGTTTGTGAGTTAGCGGCTCATTTACATTGTTTGTTGCTGAGGAAATGACATCAC
TGCCTGTTATACCAACCATGGGCAGATATCTTTTGTAAAATCAGATGTTTAGGCCAAAAC
ACGCATGTTATTATTTTAAATTGATGCAGTATCCCCACCACCTTTACTATGTGGTCCATG
AGCTACTCCAACGCATATCCATATTAGGGGCCCATGATACCCACATAATATTAAGTGGTA
AGCAGTTCAAATGGTCCAAGATAGCAAGTTACCAATCCCTATTCCACTTTTCCATAAACT
AATGGAATTATAAGGTGATTAGTTGCACACTTGTAAAAATTTAATCAAACATATTGCTGA
AAAGTTTTGCCACCAAGATTGCAATCATATTATTATAAAAATGCTATGTAACTACAGACA
ACAGTCACAGATACTACATGGACCATTCTGTTTGTAAATAAAACATTTTTTTCCAAAA
| Pfam |
Requiem/DPF_N_dom (IPR025750) - T[6-76] 8.0E-33 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[188-212] 2.43E-5 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[188-216] 10.783 |
| SMART |
Znf_C2H2_type (IPR013087) - T[188-211] 0.0047 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[190-211] . |
| SUPERFAMILY |
Znf_FYVE_PHD (IPR011011) - T[274-338] 2.44E-6 - T[322-390] 8.42E-19 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[278-397] 3.1E-38 |
| ProSiteProfiles |
Znf_PHD-finger (IPR019787) - T[279-339] 9.81 - T[336-386] 11.083 |
| SMART |
Znf_PHD (IPR001965) - T[281-337] 4.2E-9 - T[338-384] 4.7E-13 |
| Pfam |
Znf_PHD-finger (IPR019787) - T[339-385] 2.0E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| REQU_HUMAN | 39.713 % | 277 | 3.04E-90 |
| DPF3_HUMAN | 42.172 % | 305 | 3.03E-101 |
| DPF1_HUMAN | 61.364 % | 167 | 5.54E-48 |