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- Transcript 'KH2012:KH.C11.535.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.535.v1.A.SL17-1
Possible name(s)
DPF1; DPF2; DPF3
Gene model
Location
KhC11 [4,350,686 / 4,355,749]
Amino acid sequence
Length: 399
>KH.C11.535.v1.A.SL17-1
MSGNDGFYKEALEHCRTFNSRLMTERRVRLPYLDSQTRVAQSDCCLWFKRRHRGPGLKPN
QVYCYPSKRWKKRPRFTPLVDPSYEAMAAANDYKSMLRSSDVPHHLINENSNDSSSMNTI
TSAMIDADNEMLDNVSNNEDNGAIDEDEDFEDFENGKSKKKGRKSQFKAATRSGRKSDVT
TDDKYHTCDYCGKKYKNKTGLNYHVQHVHQDELDADEEYTPSGRHSPSSIMSDDHHSTSS
RTSAIAAQKAVAAAVADISEVEIIEPRPKRKRQTQSNNYCDFCLGDADENKKTGESEELV
SCSDCGRSGHPTCLQFTDIMTMNVKKYSWQCIECKSCHVCGTSDNDEQLLFCDDCDRGYH
MYCLQPRMENPPEGSWICNLCENDRKEREKLASHGTLSL
Nucleotide sequence
Length: 1,666
>KH2012:KH.C11.535.v1.A.SL17-1
ACATGTCGGGAAACGATGGGTTCTATAAAGAAGCGTTGGAACATTGTCGCACGTTCAATA
GTCGGCTGATGACAGAACGAAGGGTTCGATTGCCTTACCTAGATTCCCAAACAAGAGTCG
CACAAAGTGATTGCTGCCTTTGGTTCAAAAGAAGACATCGTGGACCTGGTTTAAAACCAA
ACCAAGTATATTGCTACCCCAGCAAAAGATGGAAGAAACGACCCCGTTTCACCCCGCTGG
TGGACCCCTCGTATGAAGCAATGGCTGCTGCAAACGATTACAAAAGTATGCTGAGATCCT
CTGATGTCCCTCATCATCTGATCAATGAAAACTCGAACGATTCAAGCAGCATGAACACGA
TAACTTCTGCGATGATCGACGCCGACAACGAAATGCTCGATAACGTTTCAAACAACGAGG
ATAACGGGGCTATCGACGAGGACGAAGATTTCGAAGATTTTGAAAACGGGAAGTCAAAGA
AAAAGGGAAGGAAAAGTCAATTTAAGGCGGCCACAAGATCTGGTAGAAAGAGCGACGTCA
CTACTGATGATAAATATCATACATGTGATTACTGTGGAAAGAAATACAAGAACAAGACTG
GGTTAAACTACCACGTCCAGCATGTGCATCAAGATGAACTCGATGCAGATGAGGAATATA
CTCCAAGTGGAAGACACTCACCATCCTCCATTATGTCCGATGATCATCATTCAACCTCAT
CAAGAACTTCTGCCATCGCTGCTCAGAAAGCTGTGGCAGCAGCAGTTGCTGATATAAGTG
AGGTTGAAATCATCGAACCACGACCAAAACGTAAACGACAAACTCAGTCGAACAATTATT
GCGATTTCTGTCTCGGAGATGCAGATGAGAATAAAAAGACGGGAGAATCTGAGGAGTTGG
TTTCGTGTTCTGATTGTGGGAGATCTGGCCATCCTACGTGTTTACAGTTCACTGATATAA
TGACAATGAATGTAAAGAAATACAGCTGGCAATGCATTGAATGCAAGTCATGTCATGTGT
GTGGAACATCTGATAACGATGAGCAGTTATTGTTCTGTGATGACTGCGATAGAGGATACC
ACATGTATTGCCTTCAACCCCGAATGGAAAATCCTCCAGAGGGAAGCTGGATTTGTAATC
TTTGTGAAAACGATAGAAAAGAACGAGAAAAACTGGCAAGTCATGGGACACTAAGTTTGT
GAGTTAGCGGCTCATTTACATTGTTTGTTGCTGAGGAAATGACATCACTGCCTGTTATAC
CAACCATGGGCAGATATCTTTTGTAAAATCAGATGTTTAGGCCAAAACACGCATGTTATT
ATTTTAAATTGATGCAGTATCCCCACCACCTTTACTATGTGGTCCATGAGCTACTCCAAC
GCATATCCATATTAGGGGCCCATGATACCCACATAATATTAAGTGGTAAGCAGTTCAAAT
GGTCCAAGATAGCAAGTTACCAATCCCTATTCCACTTTTCCATAAACTAATGGAATTATA
AGGTGATTAGTTGCACACTTGTAAAAATTTAATCAAACATATTGCTGAAAAGTTTTGCCA
CCAAGATTGCAATCATATTATTATAAAAATGCTATGTAACTACAGACAACAGTCACAGAT
ACTACATGGACCATTCTGTTTGTAAATAAAACATTTTTTTCCAAAA
| Pfam |
Requiem/DPF_N_dom (IPR025750) - T[4-74] 7.9E-33 |
| SMART |
Znf_C2H2_type (IPR013087) - T[186-209] 0.0047 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[186-214] 10.783 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[186-210] 2.38E-5 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[188-209] . |
| SUPERFAMILY |
Znf_FYVE_PHD (IPR011011) - T[272-336] 2.44E-6 - T[320-388] 8.42E-19 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[276-395] 3.1E-38 |
| ProSiteProfiles |
Znf_PHD-finger (IPR019787) - T[277-337] 9.81 - T[334-384] 11.083 |
| SMART |
Znf_PHD (IPR001965) - T[279-335] 4.2E-9 - T[336-382] 4.7E-13 |
| Pfam |
Znf_PHD-finger (IPR019787) - T[337-383] 1.9E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| REQU_HUMAN | 39.713 % | 277 | 3.66E-90 |
| DPF3_HUMAN | 42.172 % | 305 | 2.26E-101 |
| DPF1_HUMAN | 61.364 % | 167 | 5.79E-48 |