Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'KH2012:KH.S1877.1.v1...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S6...' > 
  3. Transcript 'KH2012:KH.C1.883.v1....' > 
  4. Transcript 'KH2012:KH.C9.53.v10....' > 
  5. Transcript 'KH2012:KH.C11.587.v1...'

Transcript Model

Transcript Id

KH2012:KH.C11.587.v1.A.ND1-1

Possible name(s)

EPDR1

Gene model

KH2012:KH.C11.587

Location

KhC11 [2,552,189 / 2,554,016]

Sequences

Amino acid sequence

Length: 203

>KH.C11.587.v1.A.ND1-1
NKTMKFFLLVALFGLTYAQDPRCAAPGYFQARVRSYDHETNYFRDGRFSYDAHEQRVRMV
EVLQENATRPQRDELILHREKKRYVVDLHTRKCNVSTVDFHFHPISVDEPARFLGYSIVG
TLDEPEMGMMVGSWHHRSEGNDIRGNLTQSFTRDECIPVSEVFYGETVKDHQMLHFHRTY
FDVTLGLDSANVFDIPKECIHRK

Nucleotide sequence

Length: 858

>KH2012:KH.C11.587.v1.A.ND1-1
ATTTATACAGTCTAGCTAGAGCTTAAATATATTAAACTCAAAAGCAATTCAACTGTATGC
AAAAAGCAGCCAATCGTTTATACTACTATCATAATTAGGTTAAAGTTAAAGTTTCAGATA
AAATAAAACCATGAAGTTTTTTTTGTTAGTTGCTCTCTTTGGGTTGACATATGCCCAGGA
TCCACGATGCGCTGCTCCAGGCTACTTTCAAGCCAGAGTAAGATCGTACGATCACGAAAC
CAACTACTTCCGTGATGGTAGATTTTCATATGATGCGCATGAGCAAAGAGTGCGCATGGT
GGAAGTACTTCAGGAAAATGCGACTCGGCCACAGCGTGACGAACTAATTCTCCACAGAGA
AAAAAAACGTTACGTGGTTGATCTTCATACTCGCAAGTGCAACGTGTCCACCGTTGACTT
TCATTTCCACCCTATATCGGTTGACGAACCAGCTCGGTTTCTTGGTTATTCGATCGTTGG
AACACTGGATGAACCTGAGATGGGGATGATGGTTGGTTCGTGGCATCATAGAAGCGAAGG
AAATGACATCAGAGGCAATTTGACTCAATCTTTCACGAGAGATGAATGCATCCCTGTTTC
TGAAGTTTTCTACGGCGAAACGGTTAAGGATCATCAGATGTTGCACTTTCATAGAACATA
CTTCGACGTCACATTGGGGCTGGATAGCGCTAATGTATTCGACATACCAAAAGAATGCAT
CCACAGAAAATGAGCTGATATTTAAAAGGCGCATAAATGACGATTTTAATTATGTAATTT
ATGTTTCTACTGTTAATTGTATCATATTAACATTGAAATTGATATTTCCAACGATTAAAA
CAGAATTGCGCTAGTCAA

InterProScan

PANTHER
Ependymin (IPR001299) - T[3-202] 1.2E-50
Pfam
Ependymin (IPR001299) - T[68-199] 1.9E-36

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value