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TRANSCRIPT CARD

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  1. Region 'REG00000563' > 
  2. Transcript 'KH2012:KH.C1.159.v1....'

Transcript Model

Transcript Id

KH2012:KH.C1.159.v1.R.nonSL2-1

Possible name(s)

HES1; HES2; HES4

Gene model

KH2012:KH.C1.159

Location

KhC1 [682,412 / 684,277]

Sequences

Amino acid sequence

Length: 279

>KH.C1.159.v1.R.nonSL2-1
RRSHHSVHTLLHHSRDYYVTIMPVERRMTEAELRRKTNKPIMEKKRRERINKCLEDLKSI
VLTAVAEESRPNKLEKADILEMTVRYLKSLQQGKPIDAGILSLSRTSDYDDSDDDTKSSM
TEYSQCDITTMLNRSDVPLHFRTQFLGHLADKHNPVERKKPQHHSTQHYSAEFDRRPILM
PGKPPHPYQIPLTPTLTFPPTPISPISSTSFIRRIPSPTSSDDDVTNHVTDCYSPPTPHT
SSSDSGVWSSGSSPPSPIQGKPFNNQPNKPTTVWRPWGL

Nucleotide sequence

Length: 1,186

>KH2012:KH.C1.159.v1.R.nonSL2-1
CGACGCAGCCACCACTCGGTACATACGTTGTTACATCACAGTCGGGATTATTACGTCACA
ATCATGCCTGTTGAACGAAGAATGACTGAAGCCGAGTTACGGCGAAAGACAAACAAACCA
ATTATGGAGAAGAAGCGACGCGAACGAATAAACAAATGTTTGGAAGATTTGAAGTCGATT
GTTCTCACCGCCGTCGCTGAAGAGTCGCGACCAAACAAATTGGAAAAAGCTGATATTCTA
GAAATGACGGTTCGATATTTGAAGTCGTTACAACAAGGCAAGCCTATTGATGCAGGTATC
CTCTCTCTTTCACGCACCAGTGATTATGACGATTCTGATGACGACACAAAATCTTCAATG
ACCGAATACTCCCAATGTGACATCACAACCATGTTGAATCGTAGCGACGTTCCCTTGCAT
TTCCGCACGCAGTTCTTGGGACATCTAGCGGACAAACATAACCCGGTTGAACGCAAGAAA
CCGCAGCATCATTCTACGCAACATTACTCAGCAGAATTCGACCGTCGGCCCATTCTCATG
CCCGGGAAACCCCCTCACCCCTACCAAATCCCACTTACCCCAACCCTAACGTTCCCACCA
ACCCCTATTTCACCTATATCATCTACGTCATTTATACGTCGTATACCCTCACCTACGTCA
TCGGATGATGACGTCACCAACCACGTGACTGACTGCTACTCTCCCCCGACCCCCCACACC
AGTAGTAGCGATTCCGGAGTTTGGTCCTCGGGTTCGAGTCCCCCTTCCCCCATTCAAGGG
AAACCATTTAACAACCAACCCAACAAACCAACCACTGTGTGGCGCCCTTGGGGATTATAG
AAATCTTATAAAGGGGCGGATTCGCAAAATGAACCAGGAGGGAATTTAGAAACCAAAGCG
ACCACTTACCAAATATTGTAGCCTTTACAAGTTACAATACCAAATGTTAATGCGTGATAT
TTAACGTGTTGTATGCAACTTAATGCAACGAACATACACACAGTCACAGCGCATGTTAAT
CCGCCCCGGCATTCCCCTATTATATTGTACCTACTGTGACTTCACGCCAGTTGCCTTATT
ATTATTTTTAACACCCCAATATGCACCGCGTAGTTTGTTCTTATATTTCTTTGCATTGTT
CTATCCTCGCTGTGCCGGTCGTGAAATAAACACGCTTATGACGTAA

InterProScan

Gene3D
HLH_DNA-bd_sf (IPR036638) - T[27-93] 6.1E-24
CDD
bHLH_dom (IPR011598) - T[34-92] 7.34402E-16
ProSiteProfiles
bHLH_dom (IPR011598) - T[34-90] 16.171
SUPERFAMILY
HLH_DNA-bd_sf (IPR036638) - T[35-92] 1.57E-14
Pfam
bHLH_dom (IPR011598) - T[35-91] 5.5E-16
SMART
bHLH_dom (IPR011598) - T[40-96] 2.9E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
HES1_HUMAN 41.176 % 81.3 5.51E-18