- Transcript 'KH2012:KH.C1.165.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.165.v1.A.SL1-1
Possible name(s)
VAMP1; VAMP2; VAMP3
Gene model
Location
KhC1 [126,615 / 137,334]
Amino acid sequence
Length: 121
>KH.C1.165.v1.A.SL1-1
HNCIKMSYGGTSNYGGPAAPTGGSSQASKKLQQTQAQVDDVVDIMRTNVDKVLERDQKLS
ELDDRADALQQGASQFETQAAKLKRKYWWKNCKMWAILIIVILVIIIIIVVSVVTQTQKK
T
Nucleotide sequence
Length: 1,302
>KH2012:KH.C1.165.v1.A.SL1-1
TAGAAAGTTCCAGTATTTCAATAATTGTAAAGATCAGCTTGATAACTAAGTTGGGTTTTT
GATACTGATTGTTTTGTGTCATATATATCTGGATTGGAGTACATCTCATAGTACCAACTG
AATAACATAACTGCATAAAAATGTCTTACGGAGGTACATCTAACTATGGAGGTCCAGCTG
CACCAACTGGAGGTTCATCCCAAGCTTCCAAGAAACTCCAGCAAACACAAGCACAAGTGG
ATGATGTTGTGGACATCATGAGGACAAATGTGGACAAAGTGCTCGAGAGGGATCAGAAGT
TATCTGAGCTAGATGACAGGGCAGATGCATTACAGCAAGGCGCGTCCCAGTTTGAGACTC
AAGCTGCAAAACTGAAGAGAAAGTACTGGTGGAAGAATTGCAAGATGTGGGCGATCCTCA
TCATCGTTATACTTGTTATTATCATTATTATAGTTGTATCCGTTGTCACCCAAACACAGA
AGAAAACTTAAGCATAAACATGGACACAATACTGATGACTGTTGCTGGCTCACTACCGAG
AATCATTCAACTATCACCAGCAACATTATTATCTTTAACCTAAGTGTATTTTCCACTCAA
CATTCAATTGTAAAGTACAAGTGTATGGTTTAGTTAGTGTCGTTTCCTTGTGCTTGCAGT
GTATGCCCAAGATTGTATCTTTCATACTTTTACCCAAAAGTATCTATATAAACATGTTAA
TATTATTGTACTGACCATTCGTGCAATTTCGTTACGTTGCTAGGTATCTATGCTTACATT
TGCACACAATTTCAACCAAGTCGAAAAGCTTTAAAATCACTTAATGCAAATTCTATTTAT
AGATGAGAAAAAATCAATATTTTCCATTCGAGAGCACATACGCTTTGTGCTTTTATCAAG
CAGGTAGAATAATCGTTGTGTTCAGTATAATTGTTACTCTGATAACATATGTAGTTAAAA
ACTTCTGTTTAAGTCAAGCTCCGCATAGCGTAACAGTATTACTCGCAAAACATGTAGTGA
ACACTCATTGTAGTTATTATGCAGACGATTTTGTCGCTGGAGGTTCCATACCGGTTTCAA
GCTGTTATTTCGAATCGGTAGTAACTTCTTACTGACGTTAATTAGTTACGGTACACGGCA
AGGCATGTTATTTTGCTTGTACATATGAAGTTTACTTTGAGCAATCGTACTAAAACTAAA
CCTACAATTGTCTTGCAAATGTAGTTGTGTGGCTAAATGTTCAGACTGTAATCTGTTACT
TGAGTATTTTCGCTTCACTTACACTTACGTCAAATTACCAAA
| PIRSF |
Synaptobrevin/VAMP (IPR016444) - T[9-120] 4.0E-42 |
| Pfam |
Synaptobrevin (IPR001388) - T[28-114] 1.7E-35 |
| ProSiteProfiles |
Synaptobrevin (IPR001388) - T[30-90] 18.683 |
| PRINTS |
Synaptobrevin (IPR001388) - T[35-54] 2.2E-30 - T[55-74] 2.2E-30 - T[91-110] 2.2E-30 |
| ProSitePatterns |
Synaptobrevin (IPR001388) - T[48-67] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| VAMP3_HUMAN | 81.707 % | 138 | 9.51E-44 |
| VAMP2_HUMAN | 84.722 % | 126 | 4.59E-39 |
| VAMP1_HUMAN | 80.556 % | 124 | 3.53E-38 |