- Transcript 'KH2012:KH.C11.657.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.657.v1.A.SL1-1
Possible name(s)
DBX1; DBX2; HLX
Gene model
Location
KhC11 [3,565,681 / 3,569,663]
Amino acid sequence
Length: 558
>KH.C11.657.v1.A.SL1-1
EIKAMASATANIRDTMRFKERGKCQQNFNRMGIVDLSVGKYGLKIANQSPELNGKVFTDQ
VPNCEERQSSGRKNSLKFGIDAILGSKEESEKKIERNPRQQKSPPTLADVARISGTPSDI
ENREGRAFNLVNLFAQQCHQNLNRLNKRNEVLKRPQFHPYAEGLQDINLARHALDSLSNG
KPAMPFETNPVVETKRSLDSLRVQSNLCTSGADRTRPYCISQAKHAAAEHRASQNPRQGN
ANRNPAEAVGSLRSDGDVSNRAQKFLPITNKHDSNYKHSDNPREFLPPAYAIYEQGLKER
SSPDSDDVFHEEPSHPSYPSSSTKPYFPRHYSLHSEPMTSPERISPPQQTEGRTTHQLSH
FAQASVGNPQNETQKMNFQHGLPLATFQAWQALAYHPALRNILPTAYPYDSRSAAAMALA
LRPSLKSASSLGPFRENSATFHHQRGRAFSSNAAMPPQLYNDSRGAPKKRRKWSRAVFSL
MQRRGLEKSFQVQKYVAKPERRGLAEALGLTDAQVKIWFQNRRMKWRQELKGRNESNPCS
PTEKVPSSSPTLPRLNSE
Nucleotide sequence
Length: 2,161
>KH2012:KH.C11.657.v1.A.SL1-1
GTTATTTATACCTATAGAAAAGTATTAGAAACTCTGTTTTATAAGAAATTAAGGCGATGG
CTTCGGCTACAGCAAACATAAGAGACACCATGCGATTTAAAGAAAGAGGGAAATGCCAGC
AGAATTTTAACCGTATGGGTATTGTCGATCTCAGTGTCGGAAAATACGGTTTAAAAATTG
CGAACCAAAGTCCAGAATTAAACGGGAAAGTCTTCACTGATCAGGTTCCAAATTGTGAGG
AACGACAATCAAGTGGTCGAAAAAACAGCCTCAAATTCGGCATCGATGCGATTTTAGGTT
CCAAAGAGGAATCTGAGAAAAAAATAGAAAGGAATCCTCGTCAGCAAAAATCGCCGCCAA
CTCTTGCCGATGTTGCGCGTATTTCTGGAACACCCTCTGACATTGAAAACAGGGAAGGAA
GAGCCTTCAACCTTGTTAACTTATTCGCCCAGCAATGCCATCAGAATCTAAACAGACTTA
ACAAACGCAATGAAGTTTTAAAAAGGCCACAGTTTCATCCATATGCCGAAGGTCTTCAGG
ATATAAACTTAGCCAGACACGCCCTGGATTCTTTAAGCAACGGGAAGCCAGCCATGCCGT
TTGAAACTAACCCTGTTGTCGAAACAAAGCGCAGTTTAGATTCATTACGGGTTCAGTCCA
ACCTATGCACCAGCGGCGCCGATAGGACCCGGCCATATTGCATTTCGCAGGCGAAGCACG
CCGCCGCCGAACACCGGGCGTCACAGAATCCTCGGCAGGGAAACGCGAATCGAAATCCGG
CAGAAGCCGTCGGATCGCTTCGAAGTGACGGTGACGTTTCGAACCGCGCACAGAAGTTCT
TACCAATCACAAACAAACATGACAGCAATTATAAACACTCTGACAATCCTCGTGAGTTTC
TACCCCCAGCATATGCGATATATGAACAAGGGTTGAAAGAAAGATCATCCCCAGATTCTG
ATGACGTTTTTCATGAAGAACCGTCACACCCATCTTACCCTTCCTCGTCCACAAAACCTT
ACTTTCCACGTCATTATTCCCTGCATTCCGAACCAATGACGTCACCAGAGCGTATTTCGC
CACCACAACAAACCGAAGGTCGCACCACACATCAGCTTTCTCATTTTGCGCAGGCATCAG
TCGGAAACCCGCAAAACGAAACGCAGAAAATGAATTTCCAGCATGGCCTACCTCTCGCCA
CTTTTCAAGCATGGCAAGCACTCGCGTACCACCCGGCGCTGAGGAACATTTTACCGACGG
CGTATCCTTACGACAGTCGAAGTGCTGCAGCAATGGCGCTGGCGCTTCGACCAAGCCTGA
AAAGTGCCAGCTCTCTTGGTCCGTTCCGGGAGAACAGCGCCACTTTCCACCACCAACGAG
GAAGGGCGTTTTCTTCCAACGCTGCAATGCCACCACAGCTCTATAACGATAGCCGTGGAG
CGCCAAAGAAAAGGCGGAAGTGGAGCCGCGCTGTTTTCAGTCTGATGCAGAGGCGTGGGC
TAGAAAAGAGCTTCCAGGTTCAGAAATACGTTGCGAAACCTGAACGCAGAGGACTGGCTG
AAGCTCTTGGTCTCACCGATGCGCAGGTGAAAATTTGGTTCCAAAATCGCCGTATGAAAT
GGCGGCAAGAACTAAAAGGTAGAAATGAGTCGAACCCGTGCTCGCCTACTGAGAAAGTTC
CAAGTAGTTCTCCGACGTTACCACGTCTAAATTCGGAATGAGCCAATTTTGTGCGTGAGA
AGGTTTACATGGCCTGTCTGAGGAGGTGCAATATCAGACATAAAGTTAAACTGATATACA
AGAAAGACGTTAATCTTCATGTGAATGCCAAACAGGCTGCGGCTGGATATTGGGAAACAC
GATTTGTCATTCCGACTCGGCAAAGTTTTGTGGCCCTAGTTGACCTAGTCTTGCTTCTCG
GAAAGTCTGTGCATTTCCCTGCATCAATACGATTGACAATGTAGCGGTATATATGGGCGT
ATTTATCATAGCCCCAGCATTCAAGATAAACCACACACCGATCCATCACTGCCCGTGTCC
TATTGTCTTTTTAAGCAATGTGTCTACTGCCCCAGAATTGATATTTGTGTTGTTTGTTTC
ATGTTTTTTATTCGGACGTTTCCGTACAAGATGTTTGTAAATAAAATTCAATTTTTTGAA
A
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[456-528] 3.46E-20 |
| SMART |
Homeobox_dom (IPR001356) - T[469-533] 2.3E-19 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[469-529] 18.949 |
| CDD |
Homeobox_dom (IPR001356) - T[472-527] 1.18252E-16 |
| Pfam |
Homeobox_dom (IPR001356) - T[474-528] 4.4E-18 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[493-504] 7.2E-5 - T[508-518] 7.2E-5 - T[518-527] 7.2E-5 |
| PRINTS |
HTH_motif (IPR000047) - T[500-509] 1.7E-5 - T[509-525] 1.7E-5 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[504-527] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DBX1_HUMAN | 64.615 % | 88.6 | 3.73E-19 |
| DBX2_HUMAN | 51.087 % | 82.8 | 3.46E-17 |
| HLX_HUMAN | 66.197 % | 105 | 4.15E-24 |