- Transcript 'KH2012:KH.S1735.3.v1...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C11.682.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.682.v1.B.ND1-1
Possible name(s)
SLCO1B3; SLCO4A1; SLCO4C1
Gene model
Location
KhC11 [4,918,621 / 4,925,159]
Amino acid sequence
Length: 371
>KH.C11.682.v1.B.ND1-1
TTSQHRGCKSGREDEIHGGKRGEDGMGESRFSHIWHSVVILLRNPTFILVTLAATMDACL
VIGLTTFGPKYLESMFALSPTQAATYFGILAILAGVSGQFLGGFVVTKARLSVPGILKFC
SICSLIASATSFMFFQHCPDIKFAGATIPYMGESNLSSTSHVSMCNQACNCNNDLYDPVC
GGDGVTYYSPCFAGCVGVFDNKTYSDCGCISSNFTHTATPGVCTNSTCATRGIFLFVFFI
SILSTFSAGTPAVQAVLRVVPFTQRSFAIGVKFVILRVVGSIPGPILFGRVLDLACVVWS
SECGEQGFCRLYKNVTLSSNMATLIVVLKVYLCLFAIIIVKVRIPASGLEVTGWSLDAAT
FLGISDLGQDT
Nucleotide sequence
Length: 2,022
>KH2012:KH.C11.682.v1.B.ND1-1
TTTTGTTTCTTTTCTTTTGTTTTTATTTTAAATATTTGTTTGTATATATTTTGTTTTTTT
GTTTTGTTGTCTTTGATCCAACTAAATGATCTCGGTACCGAGAGGTTCGAGCAGTTTTCG
CGGAAATCCAAGCACTGATGAGTCGTGCGGATGCCAAGTGGGGTGTGGGAGTAGTAAACG
AAGGTTTTACATTTCTTTCCTCCAGAGGTTTGCGACTCCCAAAGGAGCTTTGTTTTTCCT
TTGTTGCGCAAGTATTGCACAAGGTTTCATAATAAGTGGATTGTTTGGGGTGATTGTGTC
AACTTTGGAAAAGAGGTTCCATTTGCACAGTACAGAGACTGGTCTCATAGCGAGCAGTTA
TGACATCTCATCCTGCATCTCGGTCCTTATCATCACATATATTGGTGGTAGAGGCCACAA
ACCACTCTGGATAGGGTGGGGTGTTTTCCTTATGGGCATCGGGTCCATTGTGTTCAGCTC
CCCGCATTCCTTTGCGCCAAGTTATGTATACGGGGAGGAAAGTCACAATGTTTGTAACTC
AACCGTTGAACAAGGAAAATGTATGGAGTCAAGCTTAAAGAGTTACATGGGTTTGTTTGT
TGTTGGTCAGTTGTTACACGGGATCGGCGGTACAACGTTATTTACCCTCGGTGTTACATA
TCTCGATGAAAATGTTAAACAAGTGCATTCGTCTTTATATCATGGTATTTATTACTCAAG
TGCCGTCCTTGGTCCAGCCGTGGGGTTTTTACTCGGGAGTCGATTTCTTACGATTTATAC
AAATCTGGGGGAAATAGTTGAAATAAACGAACCGAGTACGTTATGGATTGGAGCTTGGTG
GTTGGGGTTTCTAGTGGGAGGCGTCATCCTCATCGTTCTCTCTCTACCCATCCTCTTACT
TCCTAAACAACTTCCCAACACAGAGGATGCAAGAGTGGGAGGGAGGATGAGATTCATGGG
GGGAAGAGGGGAGAGGATGGGATGGGAGAAAGCAGGTTTTCCCATATCTGGCACAGCGTT
GTTATATTATTGCGCAACCCCACATTTATCCTCGTTACACTGGCTGCAACCATGGATGCA
TGCTTGGTTATTGGGTTGACCACGTTTGGACCAAAGTATTTGGAATCCATGTTTGCGTTA
TCACCTACTCAAGCTGCAACATACTTTGGTATCCTTGCCATACTCGCAGGCGTGTCCGGA
CAATTCCTCGGGGGATTTGTCGTAACTAAAGCTCGATTATCCGTGCCGGGAATCCTTAAG
TTTTGTTCCATTTGTTCGTTGATTGCTTCGGCAACAAGTTTCATGTTCTTTCAACATTGC
CCAGATATTAAATTTGCGGGAGCCACCATTCCATATATGGGCGAAAGTAATTTATCCTCA
ACGTCCCATGTTTCGATGTGCAATCAAGCGTGTAATTGTAACAATGACCTTTATGACCCC
GTGTGTGGGGGGGACGGGGTGACTTATTACTCGCCATGCTTTGCTGGGTGTGTGGGTGTA
TTTGATAATAAGACGTACTCGGATTGTGGTTGCATTTCCTCGAACTTCACCCACACAGCG
ACACCTGGTGTTTGCACGAATTCGACGTGCGCAACACGTGGAATCTTCCTTTTTGTTTTC
TTTATTTCTATCCTTTCAACCTTCTCGGCAGGAACACCTGCTGTGCAAGCCGTGTTGCGC
GTCGTGCCCTTCACGCAGCGATCGTTTGCTATTGGGGTTAAGTTTGTGATCCTGCGAGTC
GTCGGCAGCATCCCAGGTCCGATATTATTCGGACGAGTGCTCGACCTTGCATGCGTGGTA
TGGAGTTCTGAATGTGGAGAACAAGGTTTCTGCCGGTTGTACAAGAATGTTACTCTGTCA
TCTAACATGGCAACTCTTATAGTTGTGCTTAAGGTATATCTTTGTTTGTTTGCAATAATT
ATTGTTAAAGTTAGAATTCCAGCCTCCGGTCTAGAGGTTACAGGTTGGAGTCTCGACGCT
GCTACCTTTCTGGGCATAAGTGACCTTGGGCAAGACACTTAA
| PANTHER |
OATP (IPR004156) - T[28-338] 5.6E-97 |
| Pfam |
OATP (IPR004156) - T[28-315] 1.8E-70 |
| SUPERFAMILY |
MFS_trans_sf (IPR036259) - T[29-142] 4.05E-12 - T[233-335] 4.05E-12 |
| ProSiteProfiles |
Kazal_dom (IPR002350) - T[159-211] 11.073 |
| SUPERFAMILY |
Kazal_dom_sf (IPR036058) - T[159-202] 2.63E-8 |
| Pfam |
Kazal_dom (IPR002350) - T[167-209] 6.0E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SO4A1_HUMAN | 41.667 % | 228 | 1.78E-68 |
| SO4C1_HUMAN | 35.097 % | 188 | 8.31E-54 |
| SO1B3_HUMAN | 31.818 % | 171 | 9.24E-48 |