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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C14.583.v1...' > 
  2. Transcript 'KH2012:KH.C11.685.v1...'

Transcript Model

Transcript Id

KH2012:KH.C11.685.v1.A.SL1-1

Possible name(s)

DPCD

Gene model

KH2012:KH.C11.685

Location

KhC11 [1,228,675 / 1,231,384]

Sequences

Amino acid sequence

Length: 222

>KH.C11.685.v1.A.SL1-1
CISGELVVQIFVFFEMSDHSAWVELLKSARKTSLLQDEKRKIHFTMPDGTELCEEYDVKT
NELLIRKWRKKTALGGQKPWEFEIGEPDITDQVAALTHGTKDLVESFTSPKCFRCDNSLS
FQWRIRNLPYPLSNFQVSVDADGKSIVVRTKNKKYYKVINIPDMDRYNLQLSQSDLTFAH
ANNTLIIQYKKPETIKKDQTLLVQEFKRMKTGKDGDTECKTS

Nucleotide sequence

Length: 1,652

>KH2012:KH.C11.685.v1.A.SL1-1
GTTAATGCATAAGTGGTGAACTTGTTGTGCAAATATTTGTATTTTTCGAAATGTCGGACC
ATTCTGCATGGGTGGAGTTACTGAAGTCAGCACGCAAAACTTCATTACTACAAGATGAAA
AAAGAAAGATTCATTTCACAATGCCGGATGGTACAGAATTATGTGAGGAGTATGACGTTA
AAACAAATGAACTTCTGATTCGAAAATGGCGGAAAAAGACTGCACTTGGTGGTCAGAAAC
CATGGGAGTTTGAAATAGGTGAACCAGATATAACGGACCAGGTTGCTGCATTGACACATG
GGACCAAAGACTTAGTTGAGAGCTTTACCAGTCCAAAGTGTTTTCGCTGCGACAACAGTC
TATCTTTTCAATGGAGAATTCGCAATCTACCTTACCCCTTGTCCAATTTCCAAGTATCAG
TTGATGCTGATGGAAAATCTATTGTGGTTCGAACAAAAAACAAGAAATATTACAAAGTTA
TAAATATACCAGATATGGATCGGTATAATTTGCAACTTAGTCAATCTGATTTAACATTTG
CACACGCAAACAACACCTTAATTATACAGTATAAAAAACCTGAGACAATAAAAAAGGACC
AGACTCTGTTGGTTCAGGAATTTAAGCGAATGAAAACGGGAAAAGATGGTGATACTGAAT
GTAAAACAAGTTAATTTCCAATAGCTTCGTTTAATATTTGCTGAAATTGTATCATGTTGT
ATCATGGTATATTGGTATTTATTTGCGTTCATTAGTGCAACCAAAAAAGAAGTAAGTTAA
AAGCTTCAAATTAAAACGCAACTGGAGGTTGAAAAAGTTAATAAATCTTCTACTTTTCGC
CTAAACCACCCAAATTACACTTTATTGATGTACCGTAGTATGATGAGAAATAACCAAACT
CTTCTAAAACAAAGCACTAGGTAACGCCATTTTAAATTCGTTTTTAGTTCAATGAATTTT
AGATTGAAAACGTTTTTTTGTTTAAAGGGGGCCCTCATGACCCTTAAACCCCTCCGGTTG
TGCCGTTGTATGCATCTCTGTTGGACTCAATGTAGCAATTTAATGTTCTGTTTTAAATTA
TTTTCAAAATCCACTGTTTTATATTTTTCAATAAAATATCTGACAAATTCATTTTTTGCC
GCACACCGGTTAAGAGATTTGTTTACTCGCAATGTGTAGCTCGTGAGTCGTTTTGCTTAG
AAGTTTTAAAACTTGTGATTTTGGAATGCTACCCTATTTATAAATTCCAATTGTCTGTTG
GAATATCTCGATTATCAGCAAAACACGCGTAAGTGTTAATTCTAATGATGATTAAAGACG
TCCTGAATATATTTGTATTGTTGGTTCGTATTCAAAGTTGCATACCTGGTAATTCGTAAG
CTGGCATGGGGTGTATAAAACAGAACATCCGTTTTATAACGAGTGTCGCTTTCCGGCTAC
GCGAAGATAAAGCAAGCTATATATTCGTTCTATTACACAAGCTAACTTGATATTTATTTT
AAGCATTAGTGATCAAACGTTACCGCGCCTTTCTGTTTATAATATTGGGAAAACCAAACC
AAATACATTTCATTTCCTTTTATTGAACTCAATATTCCGTCGAATGATAAGTTCACCTGC
ATCAAAATGACAATAAAATAATGAAGTATATA

InterProScan

PANTHER
DPCD (IPR026224) - T[18-222] 2.4E-86
Pfam
DPCD (IPR026224) - T[22-213] 1.0E-78
PRINTS
DPCD (IPR026224) - T[52-69] 1.8E-25 - T[110-125] 1.8E-25 - T[125-140] 1.8E-25 - T[146-164] 1.8E-25

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DPCD_HUMAN 49.505 % 207 3.4E-68