- Transcript 'KH2012:KH.L149.21.v2...' >
- Clone 'cign071h06' >
- Clone 'cima86449' >
- Clone 'cima820759' >
- Transcript 'KH2012:KH.C11.700.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.700.v1.A.SL1-1
Possible name(s)
SIAH1; SIAH2; SIAH3
Gene model
Location
KhC11 [1,362,853 / 1,367,532]
Amino acid sequence
Length: 288
>KH.C11.700.v1.A.SL1-1
IKNMSRQSSNIVSVAGNERQVEGMAAGLACASGNELDLASLFECPVCFDYVLPPILQCQS
GHLVCTNCRPKLTCCPTCRGALGNIRNLGMEKVAMTVDFPCKYAASGCEVTLRYIQKPEH
EETCEYRPYSCPCPGASCKWQGSLDQVMPHLMTAHKSITNLQGEDIVFLATDINLPGAVD
WVMMQSCFGHHFMLVLEKQEKLDGHQQFFAIVQLIGTRKQAENFAYRLELNGPKRRLTWE
ATPRSIHEGVSSAIMNSDCLVFDSAIAHMFADNGNLGINVTVSMCNCS
Nucleotide sequence
Length: 1,428
>KH2012:KH.C11.700.v1.A.SL1-1
GTTTTTAAGCAACGTTAGGATGTAAAAAATAACGTTGCAAATGTAAAATGGACTTAAACT
GTTCCTGAGTCATTAAATCAAAAACATGAGCAGGCAATCGTCAAACATTGTGAGTGTTGC
TGGAAATGAAAGGCAAGTAGAAGGAATGGCTGCGGGATTGGCGTGTGCTTCTGGTAATGA
GTTGGATCTTGCAAGTTTGTTTGAATGTCCAGTTTGTTTCGACTACGTGCTACCTCCAAT
CCTACAATGCCAGAGTGGACACCTCGTGTGCACAAACTGCCGTCCAAAATTAACATGTTG
CCCTACTTGCCGTGGTGCACTCGGTAACATAAGAAACTTAGGGATGGAAAAGGTCGCGAT
GACAGTTGACTTCCCTTGCAAATACGCAGCCTCTGGATGTGAGGTAACTCTCAGGTACAT
ACAGAAGCCAGAACACGAGGAAACTTGTGAATATCGACCGTATTCATGCCCCTGTCCCGG
TGCTTCGTGCAAATGGCAAGGGTCATTAGACCAAGTCATGCCACACTTAATGACTGCACA
CAAATCAATCACAAATTTGCAGGGCGAAGACATTGTGTTTCTTGCTACTGATATTAACTT
ACCTGGAGCTGTGGATTGGGTGATGATGCAATCCTGTTTCGGACATCATTTTATGCTTGT
GCTTGAAAAACAGGAAAAGTTAGATGGCCACCAACAATTTTTTGCTATCGTGCAGCTCAT
TGGAACAAGAAAGCAAGCTGAAAATTTTGCATACAGGTTGGAGTTAAATGGCCCGAAGCG
CAGATTGACATGGGAAGCTACCCCACGCTCAATACATGAGGGTGTTTCATCTGCAATAAT
GAACAGTGATTGTCTTGTGTTTGATTCAGCTATTGCTCACATGTTTGCTGACAATGGAAA
CCTTGGCATAAACGTTACAGTATCAATGTGTAACTGTTCATGAGGGTTTAGATATCTTAC
ATATATTTTAAGGCATGATGTTTTTATCATGCCTGGTTATCCCATATACTACAAGAAGCA
GTGTAAACCCAGATGCAAAATAGAAGTGCACTAATTCATGACAAAATGAACTTGTGATCA
AACATGAATTAAAATCTGTTGAAAATTGCTTGACTATTTATATTTGCACAGTTCTTGGAT
ACTTTTCATTATTCAAAAAGTATTTTGTATTTACACATTAAAGATGATAAAATATTATCA
TATTTGAAGATATTTTATTGTTTTTTAGATACAACAACCGAGTTCCCAACTCCATTAATT
TTAATTTTTCACCATTATATTGGATGTTTATTAGCATTTGTTTGCAATTTCTTGGTATTA
TTATATTGGTGTAGTTAGTTTTGTCTACCTTTTACTGAAACTTTCACCTAAACACATGTT
GTCAGTGTTGAGGTATTTTCTGAATTAAACTTGTGCTCTGACAGATTG
| PANTHER |
SINA-like (IPR004162) - T[21-285] 9.0E-164 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[32-130] 2.9E-7 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[44-79] 9.258 |
| Pfam |
7-in-absentia-prot_TRAF-dom (IPR018121) - T[85-281] 2.4E-86 |
| ProSiteProfiles |
Znf_SIAH (IPR013010) - T[96-156] 16.455 |
| SUPERFAMILY |
TRAF-like (IPR008974) - T[97-284] 1.63E-60 |
| Gene3D |
TRAF-like (IPR008974) - T[155-285] 3.3E-72 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SIAH1_HUMAN | 78.014 % | 472 | 2.12E-170 |
| SIAH2_HUMAN | 83.6 % | 448 | 2.83E-160 |
| SIAH3_HUMAN | 54.487 % | 186 | 4.37E-58 |