- Transcript 'KH2012:KH.C11.716.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.716.v1.A.SL2-1
Possible name(s)
CTBP1; GRHPR; PHGDH
Gene model
Location
KhC11 [330,945 / 336,262]
Amino acid sequence
Length: 525
>KH.C11.716.v1.A.SL2-1
INMSVKITNVLLLDNVDPSAKKVLEENGIKATLSKEKFTPDALIKELQQYDGVVVRSATK
ITSEIIENCPKLSIIGRAGTGVDNVDVKFATKKGVIVMNTPGGNTLSAAEHTCTLVCCLA
RNVPAADASVKAGKWDRKAFMGHELFGKTLGIVGLGRIGREAATRMQSFGMTTIGFDPIV
SKEEAAKSNIEWMTLDEMWPLCDYITVHTPLIPQTKGLLNDTSFAKCKKGVRVINCARGG
IIDEEALLRALESGQCGGAGLDVYVEEPPTNIALVRHPKVISCPHLGASTTEAQTRCGRE
IAEQFVNVSKGTDFFGVLNAPALSQAASTDMKPWISVATNLGKVVQAFMKNTAVTTLYTQ
GANLSKSGKCLEAALCAGLLCSNSSSVNLINAASISSDLGVNVTVKQDEVKPGSKHSYCR
LEAKCETMTLSLLGMVFEHTPLLVSINNQPLSPALQFNDNLLIYKGEPSSLPNTIGVLSQ
SGEVKSLSSTSVQGGSRWFAITTAQAVSKDAISKIYSENVASISF
Nucleotide sequence
Length: 1,848
>KH2012:KH.C11.716.v1.A.SL2-1
ATTTCCCTTTAAATAAACACAATTGAATAAATATGTCCGTCAAAATAACAAACGTACTTC
TGCTGGATAATGTAGATCCTTCAGCAAAGAAAGTTCTGGAAGAAAATGGAATTAAAGCAA
CTTTAAGTAAGGAGAAGTTCACACCAGATGCTTTGATTAAGGAACTACAGCAATATGATG
GCGTTGTGGTTCGTTCTGCCACAAAGATCACGTCAGAAATCATCGAAAATTGTCCCAAAC
TTTCGATAATCGGACGAGCAGGCACGGGGGTCGATAACGTTGATGTTAAATTTGCTACTA
AGAAAGGAGTTATTGTTATGAACACTCCCGGTGGCAACACACTCAGCGCAGCGGAACACA
CGTGCACGTTGGTTTGTTGTCTCGCACGAAACGTACCAGCTGCTGATGCTTCGGTCAAAG
CTGGGAAATGGGATCGAAAAGCTTTCATGGGTCACGAGTTGTTCGGGAAAACTCTCGGCA
TTGTTGGACTTGGTAGAATAGGAAGGGAAGCGGCTACGAGGATGCAAAGCTTTGGCATGA
CGACGATAGGTTTTGATCCAATTGTTTCAAAAGAAGAAGCTGCCAAGTCTAATATTGAAT
GGATGACGTTGGATGAGATGTGGCCGTTATGTGATTACATCACCGTGCATACACCTCTTA
TACCACAAACTAAAGGTTTGTTGAACGACACATCGTTTGCAAAATGCAAGAAAGGTGTCC
GTGTTATAAACTGTGCGCGGGGAGGAATTATTGATGAAGAAGCTCTCTTGAGGGCGCTAG
AGAGTGGTCAGTGTGGGGGAGCAGGGTTGGATGTCTATGTTGAAGAACCTCCAACCAACA
TTGCTCTTGTGCGCCACCCCAAGGTTATTTCATGTCCCCACTTGGGAGCGAGCACAACTG
AAGCTCAAACACGTTGTGGAAGAGAAATTGCCGAACAATTTGTCAACGTGTCAAAAGGAA
CCGATTTCTTTGGCGTTTTGAACGCACCTGCTCTCTCACAAGCTGCGTCCACGGATATGA
AACCTTGGATCTCCGTGGCAACCAACCTCGGCAAAGTTGTTCAAGCTTTCATGAAGAATA
CAGCAGTGACAACTCTTTATACACAAGGTGCTAACCTTTCCAAAAGTGGTAAATGTTTGG
AAGCTGCTTTATGCGCTGGTTTGTTGTGCTCTAACTCCTCTAGTGTCAATCTAATCAACG
CAGCTTCAATATCGTCCGATCTTGGAGTGAATGTAACTGTGAAGCAAGATGAAGTTAAAC
CTGGTTCCAAACATTCTTATTGTAGATTGGAAGCAAAATGTGAAACAATGACATTAAGCC
TCCTAGGCATGGTATTCGAACACACACCACTGCTGGTATCAATAAACAACCAGCCATTAT
CACCAGCTTTACAATTCAATGATAATTTGTTGATATATAAAGGCGAACCATCATCACTAC
CAAACACAATTGGCGTGCTCAGTCAATCTGGTGAAGTGAAGTCACTTTCAAGCACATCTG
TACAGGGTGGATCTCGTTGGTTTGCCATTACAACAGCACAAGCTGTATCGAAAGACGCAA
TCAGCAAAATCTACTCTGAAAACGTTGCATCAATAAGCTTTTAAAAAACTGTAGCAAATT
TACAAAACATGTCTTCAATCTGCATTGTCAACAATTGCCTTATTAGTTAATTAGTGAATT
TTGAAGTTTCGTGTTAAATCCTGTAAGTTTCCACTGTTCAGCTTTTGAAACCATTTTGGT
GCTCGAAAATTTAAGTCACTCCATAAGAATGTCATATACGCTGTAATTTTGCTTGGAATT
GTATCATTGTACTCAAAAATTAGATGAATAAAACTTGAAATTAATGTA
| TIGRFAM |
PGDH (IPR006236) - T[9-465] 2.8E-137 |
| Pfam |
D-isomer_2_OHA_DH_cat_dom (IPR006139) - T[10-312] 4.0E-35 |
| SUPERFAMILY |
NAD(P)-bd_dom_sf (IPR036291) - T[104-288] 6.22E-55 |
| Pfam |
D-isomer_DH_NAD-bd (IPR006140) - T[114-287] 9.8E-57 |
| ProSitePatterns |
D-isomer_DH_CS1 (IPR029752) - T[150-177] . |
| ProSitePatterns |
D-isomer_DH_CS (IPR029753) - T[227-243] . |
| Gene3D |
ASB_dom_sf (IPR029009) - T[325-453] 1.2E-10 |
| SUPERFAMILY |
ASB_dom_sf (IPR029009) - T[330-450] 1.49E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GRHPR_HUMAN | 34.956 % | 119 | 4.69E-30 |
| SERA_HUMAN | 49.901 % | 498 | 5.25E-173 |
| CTBP1_HUMAN | 29.412 % | 124 | 5.47E-31 |