- Transcript 'KH2012:KH.C11.718.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.718.v1.B.ND2-2
Possible name(s)
FOXA1; FOXA2; FOXA3
Gene model
Location
KhC11 [1,117,434 / 1,119,851]
Amino acid sequence
Length: 493
>KH.C11.718.v1.B.ND2-2
ILEEMFPSSNSDMIPAPAPRYPVSYQPAGYASTTPGISGAYPNPISTYTSNPAGVITSQI
PPAFAPTLPHPSSGQFPQQLNSHVGVSSPYPAMTPNMGISPNMAIVPGSMGRASDKGNAY
RRTYTHAKPPYSYISLITMALQSCQNKMMTLSEVYQWIMDLFPFYRANQQRWQNSIRHSL
SFNDCFVKVPRSPDKPGKGSYWSLHPDAGNMFENGCYLRRQKRFKCEKKAAQKAAQQEAR
IKEENKDDMKDGDEHMDPRNELSQLNMTLEPDKLIDTKPIHSSTEMTTVLTAIPSAIVAP
SNPPTMYGYPGHQSFMPPSIHSMMAPGESSHMSAHPQMHTMTSIKSDAQSFSHHPFSINS
LIVNDNKDMRSYEALQMQYYNPMQQGPGLIPLPPSTIQQYGTHSMHPENLPPSTTPTTTV
DHNGLSGELHPHVLQVVTPSGVYINNNSNSNNNNNNSNNNNSHNKYNNHSNKFHNNSRHH
NNSKHHECRVILF
Nucleotide sequence
Length: 2,052
>KH2012:KH.C11.718.v1.B.ND2-2
TTGGATCCTACCCCAGTAAGCAGCAGAATTAGTTGTGCTCTAGATTTTGGAAGAAATGTT
TCCTAGTTCGAACAGTGACATGATACCGGCGCCGGCTCCGAGGTACCCAGTGTCATACCA
ACCAGCAGGATATGCTAGCACTACTCCAGGAATTTCAGGCGCGTATCCGAATCCTATTTC
AACGTATACCAGCAACCCAGCTGGAGTTATAACGAGCCAGATACCTCCTGCTTTTGCGCC
AACTCTACCCCACCCTTCGAGTGGTCAATTTCCCCAGCAGTTAAACTCGCATGTCGGAGT
TTCATCGCCTTACCCAGCCATGACCCCAAACATGGGAATAAGTCCAAACATGGCGATAGT
TCCGGGTTCAATGGGTAGGGCAAGCGACAAGGGAAATGCGTACAGGCGCACTTACACTCA
TGCTAAGCCACCGTATAGCTATATATCTCTGATAACAATGGCGCTGCAGTCTTGTCAGAA
TAAAATGATGACTCTTAGCGAGGTGTATCAGTGGATCATGGACCTTTTCCCTTTCTACCG
AGCAAATCAACAGCGCTGGCAAAACTCAATACGTCATAGCTTGTCGTTCAACGACTGCTT
CGTAAAGGTTCCACGATCGCCGGACAAACCCGGCAAAGGTTCCTATTGGAGTCTCCACCC
CGACGCTGGAAATATGTTTGAAAATGGATGTTACTTGCGAAGACAGAAACGTTTCAAATG
CGAAAAGAAGGCGGCACAGAAGGCTGCACAACAAGAAGCAAGAATAAAAGAAGAAAACAA
AGACGACATGAAAGACGGAGATGAGCACATGGATCCAAGAAACGAACTTTCCCAATTAAA
CATGACCCTTGAACCTGACAAGTTGATTGACACGAAACCGATCCACTCATCAACAGAAAT
GACAACTGTTTTAACTGCTATACCATCGGCAATAGTTGCCCCATCAAACCCACCGACCAT
GTATGGCTACCCAGGACACCAAAGCTTTATGCCCCCGAGTATTCACTCAATGATGGCTCC
AGGAGAAAGCAGTCACATGTCTGCTCACCCACAAATGCACACGATGACATCAATTAAAAG
CGACGCCCAGTCCTTTTCCCACCACCCCTTCTCTATTAACAGTTTGATCGTCAACGACAA
CAAAGACATGAGATCCTACGAGGCGCTTCAGATGCAATACTACAACCCAATGCAACAAGG
ACCCGGTTTGATTCCACTACCACCTTCTACAATTCAACAGTACGGCACTCACTCAATGCA
CCCAGAGAACCTGCCACCTTCCACCACCCCTACAACAACTGTTGATCACAACGGCCTATC
TGGTGAGCTCCATCCTCACGTTCTTCAAGTAGTGACACCCAGCGGCGTATACATCAACAA
CAACAGCAACAGCAACAACAACAACAACAACAGCAACAACAACAACAGCCACAACAAGTA
CAACAACCACAGCAACAAGTTCCACAACAACAGCAGACATCACAACAACAGCAAGCACCA
TGAGTGTCGGGTGATTCTATTCTAAAAGTTATGAGATTTATTATTTGTTGCAAACCAAGT
GGTATTCATGTACCAAAAGAATTTTTTTTTGTATAACTTAGCTCAATGTAGATTTTGCTA
TACAGCGCCGTAATTCTCCGCTTATTTGTCATGTGACGTTTTAAACCTCTTTTTCTTTAG
CTACTAAATCAAGCTGTGTTCCATGCTGTGTCATATAGAAACAATTGTCATACCGTTGTT
TACTTTGAGTTTACGTACTGTATCCCTTGTTAAATTATTATAGACTTTCCACATTACAAA
AATGCAGGTTTTATTTTATATTAGACACGAAACTTGGTGCTTGATTGAACTTAATACATG
CGGTTTCATTTGTGTCTTGTTGTATATAAACAATTTAAAAAAATAAATCGAATGGTTGCA
ATAATTTTAACAAGTAAATCGCTTTTACTTATTTTAGTGCTGGTTGTAAAGTGATAGTGT
ACATATTGCTCTGTAAGTTGCTGCATTTTGTTCCAAATAAAATGACTGTACAATTTTTAA
TGCGGTTTGCTA
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[126-227] 2.2E-45 |
| SMART |
Fork_head_dom (IPR001766) - T[126-216] 4.1E-58 |
| ProSitePatterns |
TF_fork_head_CS_1 (IPR018122) - T[128-141] . |
| Pfam |
Fork_head_dom (IPR001766) - T[128-212] 2.7E-36 |
| PRINTS |
Fork_head_dom (IPR001766) - T[128-141] 1.2E-23 - T[149-166] 1.2E-23 - T[172-189] 1.2E-23 |
| CDD |
Fork_head_dom (IPR001766) - T[128-205] 6.08483E-47 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[128-222] 5.9E-39 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[128-222] 38.28 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[172-178] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXA3_HUMAN | 76 % | 213 | 1.23E-64 |
| FOXA2_HUMAN | 49.049 % | 224 | 9.33E-68 |
| FOXA1_HUMAN | 44.186 % | 236 | 2.47E-72 |