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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C9.404.v2....' > 
  2. Transcript 'KH2012:KH.C7.136.v1....' > 
  3. Clone 'mae33a12' > 
  4. Transcript 'KH2012:KH.C11.720.v1...'

Transcript Model

Transcript Id

KH2012:KH.C11.720.v1.A.nonSL3-1

Possible name(s)

CIRBP; TRA2A; TRA2B

Gene model

KH2012:KH.C11.720

Location

KhC11 [3,638,164 / 3,641,283]

Sequences

Amino acid sequence

Length: 289

>KH.C11.720.v1.A.nonSL3-1
QPISKMSDTEAGEYKSKTKSPVKQSRSRSRSRSADSDSSRGSKKSRSLRRSYSRSRSRSY
RSRSRSGSRRRYRRNSGSPRRSRSRSYSRGRHSSKSPMSGRKRHIGDRLNPPSGKCLGVF
GLSLYTNDSDLRSVFSRYGRITDINVVIDQKTGRSRGFGFVYFDNDDDAAEAKERANGME
LDGRNIRVDYSITKRAHTPTPGVYVGRPYAKPRDGDRYESRDRYDRGGDRHDRYYERDRY
DRGRYESRDRYRDDYRDRRDSYRRSPSPGYRRRSPSPYYRDRSPRDRYY

Nucleotide sequence

Length: 1,352

>KH2012:KH.C11.720.v1.A.nonSL3-1
AGAAAGGCGCCTCGTTTTATCTACTGGAATCCCAAATTTTAGGCTGTGTTATCGACCGAA
TTTTTTCACTTTGCAAGCTTTAACAACCAATATCCAAGATGAGCGATACAGAAGCTGGAG
AATATAAATCGAAGACCAAGAGTCCAGTGAAGCAATCTCGGTCCCGCTCACGATCAAGAT
CTGCGGATTCTGATTCTTCAAGAGGTTCCAAGAAATCAAGAAGTTTAAGACGTTCGTATT
CTCGTTCCAGATCACGTTCATACAGGTCACGTTCCCGATCTGGTTCAAGACGCAGATATC
GAAGAAACAGTGGAAGTCCAAGAAGGAGTAGGTCCAGGAGTTATTCAAGAGGCCGCCACA
GCAGTAAATCTCCCATGTCTGGAAGGAAGCGTCATATTGGAGACAGATTGAACCCACCAA
GTGGTAAATGCTTGGGAGTATTTGGTTTGAGTCTTTACACCAACGACAGTGATCTCAGAA
GTGTATTTTCAAGATATGGAAGAATAACTGATATCAATGTTGTAATTGATCAAAAGACCG
GTCGTTCACGAGGGTTCGGATTTGTTTACTTTGATAATGATGATGATGCAGCTGAAGCAA
AGGAGCGGGCTAACGGGATGGAACTTGATGGAAGAAATATTCGTGTTGATTACTCGATCA
CCAAGCGAGCTCACACACCAACACCTGGTGTATATGTTGGGAGACCATATGCCAAGCCAA
GAGATGGTGATAGATACGAATCAAGAGATCGATATGATCGTGGTGGTGACCGACATGATA
GATATTATGAACGTGACCGTTATGATAGAGGAAGATATGAAAGCAGAGACAGATACAGAG
ATGATTACCGGGATAGAAGAGACAGTTACAGACGAAGCCCTTCACCTGGATACAGACGCA
GATCTCCTTCTCCTTACTATAGAGATAGATCCCCACGTGACCGTTACTACTAAATCGCAT
TGTATTGGCACAGTGGGGACTTGACCCTGAACACCAGTGACTTGTTACATGTAGGTATTG
TTGCCTGCTATGTGTGTAAAAAACACAATGTCTTGTCAATGTTTACAAATTTGTGTGATT
TGGTTCTTTATATTCACCACTTTGGAGACACTCCTAGGTTTTGTACAAAGCGTAGAGTAA
AACCTATTGTTTTGTGTAGCATACCATTCTTTCTAGTAGTTATTCTGACTTTTTATGTTC
GCTGGTCTTCGCTTTTGTTGCCGCTGAATTGGAAATTTTTAAACTTTGGATCAAGATTTT
GCTGCATGTCAGTAAAGTCTGTTGGTCTTTCTATGTAGCTCCTCATACATTGTTACAACA
GCTTCTTTCAAATAAACTTCAGTTTTACTCGT

InterProScan

Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[49-200] 2.7E-31
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[109-221] 2.69E-30
ProSiteProfiles
RRM_dom (IPR000504) - T[115-193] 18.803
SMART
RRM_dom (IPR000504) - T[116-189] 3.0E-24
Pfam
RRM_dom (IPR000504) - T[119-187] 4.1E-20

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRA2B_HUMAN 56.842 % 185 2.84E-57
TRA2A_HUMAN 57.143 % 160 6.15E-48
CIRBP_HUMAN 51.852 % 83.2 2.08E-19