- Transcript 'KH2012:KH.C1.188.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.188.v1.A.SL1-1
Possible name(s)
TFF1
Gene model
Location
KhC1 [9,306,589 / 9,313,249]
Amino acid sequence
Length: 742
>KH.C1.188.v1.A.SL1-1
VSELVAYKKMKVCCVLLAVLVTAYIADANVPPSYDVDNQVILVFSLISAQRSGVSPNSVL
EMIFPTLMDNSIDLSREMQLALLVSAGFTRELAHATLNEVIPMMARDGKSNEEQVMTLLL
LTRQFCRKNKGSSTTCPEDEGTVLPLVAMKEERGCKGGDIYSEYPVHENDTCRCNEQGDA
MFWVSLFDRFSRQINSSSVVQTYNTTTHQLVDRIVPDQMPIIMMMILDDMQCNGTLKVNP
GSCTCNRVTEGHQATLLQYAVTSEEVQASLTPEQRRAVRQAFGAPVPRQSTTLNDYFLAS
MAGTTSPQLLSILVNRGESQSVMLRQLIMSSFGLDSSMVHLLLNGGFGNDANKVAMINYL
ASIGAVDPTILPLLLQVNQGRDFYISSLIQAGRINPLMGMIILAQQGGASQSQLLNYITQ
AVAGSSNPAYFESLTRPYIPALPSGIFPGSKLYFAHFESLGVNTCALHDLRNRIQCGYLG
ITAAACETAPYCCYNPIFLTDVEVRNATNNAILSATAVPWCYYNVFFVYHNSYYLEVKKP
TKFASPIQCLGLFKYGLTLDNTFYHLYDPANPDNGVGRLVNPRYECGFPGVTQFHCVAIR
GCCWDENSPYRVPQCYQPNGPSNLEFNFDQIPVAYKPANGSCNVNIHKIPMLYYSRVACH
YTINYHIIGYNILSIPNRVDCLTKLGCCYEDDETVVAQYPSIPRCYSREIGTIAGLPAIG
SLIRSGSTSPFGPEFPPVGGKK
Nucleotide sequence
Length: 2,616
>KH2012:KH.C1.188.v1.A.SL1-1
ATTCAGCCAGTTGATAGATAAGTTAGCGAGCTGGTAGCATACAAAAAAATGAAGGTTTGC
TGTGTTCTCCTTGCCGTTTTGGTAACAGCGTATATTGCTGATGCCAATGTCCCACCATCA
TACGATGTAGACAACCAAGTTATTCTTGTCTTTTCATTAATCAGCGCCCAAAGGTCGGGA
GTGAGCCCGAACTCTGTGCTTGAAATGATCTTCCCAACTTTAATGGACAATAGCATCGAC
CTTTCAAGAGAAATGCAACTCGCTCTTCTCGTCTCTGCTGGGTTTACCCGAGAGCTCGCC
CACGCAACTTTAAACGAAGTTATCCCCATGATGGCACGAGATGGCAAAAGCAATGAAGAA
CAAGTGATGACTTTGCTTCTTCTTACCCGACAATTCTGCCGAAAAAATAAGGGCAGCAGC
ACTACTTGCCCAGAGGATGAAGGCACAGTTCTCCCATTGGTAGCAATGAAGGAGGAACGT
GGCTGCAAGGGCGGAGATATCTACAGCGAGTACCCAGTCCATGAGAACGATACGTGCAGA
TGCAACGAACAAGGAGATGCCATGTTCTGGGTTTCACTCTTCGACCGATTCTCGAGACAA
ATTAACTCCTCCTCTGTCGTCCAAACCTACAATACTACCACACACCAGCTTGTTGATCGC
ATCGTACCCGACCAAATGCCAATCATTATGATGATGATTTTGGATGACATGCAGTGCAAT
GGTACTTTGAAAGTCAACCCAGGAAGCTGTACATGCAACAGAGTTACCGAGGGACATCAG
GCAACACTTCTCCAATATGCTGTTACATCCGAAGAAGTACAGGCCAGTCTTACACCCGAA
CAACGCCGAGCAGTTCGACAAGCATTCGGTGCACCAGTGCCACGTCAGTCCACCACCCTC
AACGATTACTTTTTGGCCAGCATGGCAGGAACCACAAGCCCACAGTTGCTCTCTATCTTG
GTAAACAGAGGCGAATCCCAATCCGTTATGCTTCGTCAACTCATTATGTCCAGTTTCGGT
CTTGACTCTAGCATGGTACATCTTCTATTAAACGGTGGATTTGGTAACGACGCTAACAAA
GTAGCAATGATCAACTACCTTGCCAGCATCGGTGCAGTCGACCCAACTATTCTTCCATTG
CTCTTGCAAGTAAACCAAGGACGGGATTTCTACATCAGCAGTCTCATTCAAGCTGGCCGA
ATCAATCCTTTGATGGGCATGATCATTCTCGCACAACAAGGAGGCGCTTCCCAGTCTCAA
CTCCTCAATTACATTACCCAAGCAGTTGCTGGCTCGTCAAACCCAGCTTACTTTGAGAGT
TTGACCCGTCCTTACATCCCCGCATTGCCTTCCGGTATTTTCCCTGGTTCTAAGCTTTAC
TTTGCTCATTTCGAGAGCCTCGGTGTCAACACATGCGCTCTGCACGATCTCAGAAACCGA
ATCCAATGCGGATACCTTGGTATCACTGCCGCTGCTTGTGAAACTGCACCATACTGTTGT
TACAACCCCATTTTCCTTACTGACGTTGAAGTACGAAATGCAACCAACAATGCTATTCTT
TCCGCCACAGCAGTGCCATGGTGTTACTACAACGTTTTCTTTGTTTACCACAACAGCTAC
TACTTGGAGGTTAAGAAACCAACAAAATTCGCATCACCAATTCAATGTCTTGGACTATTC
AAATACGGTTTAACCCTTGATAACACTTTCTACCACCTTTATGACCCAGCAAACCCAGAC
AATGGTGTTGGAAGACTTGTTAATCCTCGATATGAATGCGGTTTCCCCGGTGTGACTCAA
TTCCACTGCGTTGCTATTAGAGGATGTTGTTGGGATGAGAACTCACCATACAGAGTCCCA
CAATGCTACCAACCAAATGGACCATCAAACCTTGAATTCAACTTTGATCAAATCCCAGTT
GCTTACAAACCAGCAAATGGATCCTGCAACGTAAACATTCACAAAATCCCAATGCTCTAC
TACTCAAGAGTGGCTTGCCACTACACCATAAATTACCACATTATTGGTTACAACATATTA
TCTATCCCCAATAGAGTGGATTGCCTTACTAAACTAGGATGTTGTTATGAAGATGACGAG
ACTGTCGTTGCTCAATACCCATCTATTCCACGATGCTATTCAAGAGAAATCGGAACAATA
GCCGGTTTGCCAGCAATAGGAAGTTTAATTCGTTCTGGCAGCACATCACCATTTGGACCT
GAATTCCCACCAGTTGGAGGCAAAAAGTGAATCTGAACTATATACTTGCCTATTTCTTGT
ATAATGTAACTTGTCGTATGTTGGGCGACTTCTTTCCTTTTCATTTTTATATGTTAATGT
CACAAGACAACTGAATGGCTGCACAATAAGAAAAATACTAGAAAAATTGTACAGTTAATA
TTACTATTCAAAGCTTTGATTATTTATTCTGAGCAAAATGATAACCTGCTGTAAACTAGC
CCTCAGTCAAGTTATTGTACTGCCGTTACTGCCATGCCAATGTAGTATGCAGATTAATGT
TAACTTTTTAACAAATATTACGAGCTTTACTAAATTTTGGTGATACACGCCCACTAACGC
TGTACTGTTATGTAATAAAAAATATCACGAAAGGTT
| ProSiteProfiles |
P_trefoil_dom (IPR000519) - T[463-525] 10.318 - T[574-619] 10.438 |
| CDD |
P_trefoil_dom (IPR000519) - T[463-524] 7.61706E-8 - T[579-619] 1.10301E-11 |
| SMART |
P_trefoil_dom (IPR000519) - T[463-528] 3.8E-11 - T[574-622] 3.0E-12 |
| Pfam |
P_trefoil_dom (IPR000519) - T[465-524] 7.3E-11 - T[582-618] 4.6E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|