Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C11.88.v1.A.nonSL4-1

Possible name(s)

CNIH1; CNIH2; CNIH4

Gene model

KH2012:KH.C11.88

Location

KhC11 [1,044,034 / 1,046,478]

Sequences

Amino acid sequence

Length: 147

>KH.C11.88.v1.A.nonSL4-1
NITMSEALLLCIALIDSAILLFLSVYFIITLSDLECDFLNSSTCCAKLNRWVLPEVIAAC
FCPLVTIFAGHWILFIVNLPFPIYLVNRYLKVSAGNIGVFDPTEIHNRGLLKGHMKETMV
KLGYYVVFFFIYLYSFVYVLVSGGSSS

Nucleotide sequence

Length: 1,177

>KH2012:KH.C11.88.v1.A.nonSL4-1
GTTCTAAATACTCTTTTTCATGCTTATCAGACGTTTTAATGTTTATGTGGTGAAATTAGG
TCGACATTTTAATTCTTGTGTTTAACAATATGTACCAGTACCGTCCTGTAAAACAAATGC
TTTAAAATCCTGCTGAAAGGTTAACTTGAAGTGAAGTTGGTTTCAGCATAAACAGATCAG
CATCTTGAAACATAACCATGAGTGAAGCATTACTGCTATGCATAGCTCTGATCGACTCAG
CAATTCTGTTGTTTTTATCAGTATATTTTATCATAACATTATCTGATTTGGAATGTGATT
TTTTGAATTCCTCCACTTGTTGTGCCAAGTTAAATCGTTGGGTTCTGCCAGAAGTCATTG
CTGCTTGTTTTTGTCCTTTAGTCACCATATTTGCAGGGCACTGGATCTTGTTCATAGTAA
ACCTACCTTTTCCAATATATTTAGTAAATCGGTACTTAAAGGTTTCTGCCGGTAACATTG
GTGTTTTCGATCCAACCGAAATACATAATCGTGGTTTACTGAAAGGTCACATGAAGGAAA
CTATGGTTAAACTTGGATATTATGTGGTGTTCTTTTTTATCTACTTGTACAGTTTTGTTT
ACGTGCTCGTTTCTGGTGGATCTTCTTCCTGACCAGACTCTCCTACATTGTTTTTGTGGA
TCTTCTTCCTGACCAGACTCTCCTACATTGTTTTTGGAGTTGTTTTACTTCTGATGTTTC
AATGGAGCATAATTATATTTTATAGCAATGCAATAATGAGTTTGCCTATAGAACAAATAG
TGTCTTAATCAAAGATGGTGGTATTTTACTGGGGTTGTGCATATGCAGAATAAACTACCA
TGAAAATATAGTGGCCGTAGTTTTTGTAGGCTAGGATTAGTCCGTAGTGTAGATAATAAA
CTACCATGAAAATATAGTGGCCGTAGTTTTTGTAGGCTAGGATTAGTCCGTAGTGTAGAT
AACTCCCTTTAAAGTTGTACCAATAAGTGGTTTCTGATGTGAAAACATTTTCTTTTGTTG
ATATGAACTGATAATTGTACCTAAAATAGTGCTTTCTGATAGCTGTTTTTTTAATAACTG
CTTGTACTTCTATATTTTTTTGCTTGAATGTTACACACTTGCATGCCGTACTTTATTTAA
AACAAACTGCCGATATACACATGTTTAGTGAAATCTG

InterProScan

SMART	Cornichon (IPR003377) - T[7-134] 5.8E-60
Pfam	Cornichon (IPR003377) - T[8-134] 1.2E-43

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CNIH4_HUMAN	52.174 %	164	4.2E-53
CNIH1_HUMAN	34.677 %	75.1	4.26E-18