Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C1.2.v3.A.SL4-1

Possible name(s)

GMPR; IMPDH1; IMPDH2

Gene model

KH2012:KH.C1.2

Location

KhC1 [6,998,477 / 7,000,797]

Sequences

Amino acid sequence

Length: 191

>KH.C1.2.v3.A.SL4-1
HRYNVEIFVSSKMAEFLISGETSYVPEDGLTAAQLLNTGDGLTYNDFLILPGFIDFTASE
VDLTSALTKKISLKTPLLSSPMDTVTESDMAIGMALMGGMGFIHYNCTPEFQAAEVRRVK
KYEQGFIQNPVTLGPKATVRDVTDVKAMYGFSGIPVTDDGTPTGKLIGLVSSRDFDFLKP
EESNTPLEQVC

Nucleotide sequence

Length: 763

>KH2012:KH.C1.2.v3.A.SL4-1
AAATATAGTACGAACGTGTTACGCACTCTAGCATCGTTATAACGTTGAAATTTTTGTTTC
AAGCAAAATGGCCGAGTTTTTAATAAGCGGTGAGACCAGCTATGTACCAGAGGATGGATT
AACTGCTGCACAACTACTAAACACTGGAGATGGACTGACTTACAATGACTTTCTTATTCT
ACCCGGCTTCATTGACTTCACTGCATCAGAAGTTGATTTGACTTCAGCTTTGACAAAGAA
AATTTCATTAAAGACTCCCTTGTTGTCGTCACCCATGGACACAGTTACTGAATCAGACAT
GGCAATTGGGATGGCTCTAATGGGAGGAATGGGTTTCATACATTACAACTGCACACCTGA
GTTTCAAGCTGCTGAAGTTCGCAGAGTCAAGAAATATGAACAAGGTTTCATCCAAAATCC
TGTTACACTGGGACCGAAAGCGACAGTTAGAGATGTTACTGATGTGAAAGCAATGTACGG
ATTTTCCGGGATTCCAGTTACTGATGATGGTACACCAACAGGAAAGTTGATAGGTCTTGT
TTCATCTCGAGATTTTGATTTCTTGAAACCTGAAGAATCAAACACCCCTCTTGAACAGGT
GTGTTAGTCAAATACAATAAAACAATTGTTTAGCTTTGAACTTTGTAACTTCCTATAACA
TATTTTTGTGTTTGTTGTTTAATTTTTTTGTTGTTTTTGTCCACTCAGTTCACGATTAAA
TGTCAATTATTAATTCACTAGTAATATATTTTTATTACACCAC

InterProScan

Gene3D	Aldolase_TIM (IPR013785) - T[13-191] 2.9E-76
Pfam	IMP_DH_GMPRt (IPR001093) - T[41-130] 3.4E-31
ProSiteProfiles	CBS_dom (IPR000644) - T[126-187] 10.396
Pfam	CBS_dom (IPR000644) - T[129-174] 7.2E-5
SMART	CBS_dom (IPR000644) - T[129-180] 6.2E-4

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
IMDH2_HUMAN	71.91 %	273	2.8E-90
IMDH1_HUMAN	70.225 %	263	1.21E-86