Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C1.2.v4.A.nonSL5-1

Possible name(s)

GMPR; IMPDH1; IMPDH2

Gene model

KH2012:KH.C1.2

Location

KhC1 [6,997,563 / 7,000,797]

Sequences

Amino acid sequence

Length: 245

>KH.C1.2.v4.A.nonSL5-1
NYHSVKMLKHDSLDLPYEPDAPSSSRDQNNNRGMSEEIYGDYLTTSASWRMRTFFNKVLN
RSNSDKMAEFLISGETSYVPEDGLTAAQLLNTGDGLTYNDFLILPGFIDFTASEVDLTSA
LTKKISLKTPLLSSPMDTVTESDMAIGMALMGGMGFIHYNCTPEFQAAEVRRVKKYEQGF
IQNPVTLGPKATVRDVTDVKAMYGFSGIPVTDDGTPTGKLIGLVSSRDFDFLKPEESNTP
LEQVC

Nucleotide sequence

Length: 899

>KH2012:KH.C1.2.v4.A.nonSL5-1
GATAAAACTATCATAGTGTTAAAATGTTAAAACATGATTCACTTGATCTACCTTACGAGC
CGGATGCTCCGAGCTCTTCGAGGGACCAAAATAATAACCGCGGGATGTCAGAAGAGATCT
ATGGAGATTATTTGACAACTTCTGCATCGTGGAGAATGAGGACTTTCTTTAATAAAGTTC
TTAACCGTTCAAATTCAGACAAAATGGCCGAGTTTTTAATAAGCGGTGAGACCAGCTATG
TACCAGAGGATGGATTAACTGCTGCACAACTACTAAACACTGGAGATGGACTGACTTACA
ATGACTTTCTTATTCTACCCGGCTTCATTGACTTCACTGCATCAGAAGTTGATTTGACTT
CAGCTTTGACAAAGAAAATTTCATTAAAGACTCCCTTGTTGTCGTCACCCATGGACACAG
TTACTGAATCAGACATGGCAATTGGGATGGCTCTAATGGGAGGAATGGGTTTCATACATT
ACAACTGCACACCTGAGTTTCAAGCTGCTGAAGTTCGCAGAGTCAAGAAATATGAACAAG
GTTTCATCCAAAATCCTGTTACACTGGGACCGAAAGCGACAGTTAGAGATGTTACTGATG
TGAAAGCAATGTACGGATTTTCCGGGATTCCAGTTACTGATGATGGTACACCAACAGGAA
AGTTGATAGGTCTTGTTTCATCTCGAGATTTTGATTTCTTGAAACCTGAAGAATCAAACA
CCCCTCTTGAACAGGTGTGTTAGTCAAATACAATAAAACAATTGTTTAGCTTTGAACTTT
GTAACTTCCTATAACATATTTTTGTGTTTGTTGTTTAATTTTTTTGTTGTTTTTGTCCAC
TCAGTTCACGATTAAATGTCAATTATTAATTCACTAGTAATATATTTTTATTACACCAC

InterProScan

Gene3D	Aldolase_TIM (IPR013785) - T[67-245] 6.8E-76
Pfam	IMP_DH_GMPRt (IPR001093) - T[95-178] 6.6E-31
ProSiteProfiles	CBS_dom (IPR000644) - T[180-241] 10.396
SMART	CBS_dom (IPR000644) - T[183-234] 6.2E-4

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
IMDH2_HUMAN	71.91 %	274	8.27E-90
IMDH1_HUMAN	70.225 %	265	2.62E-86