Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C12.114.v1.A.ND3-1

Possible name(s)

UBE2D1; UBE2D2; UBE2D4

Gene model

KH2012:KH.C12.114

Location

KhC12 [3,878,614 / 3,881,192]

Sequences

Amino acid sequence

Length: 165

>KH.C12.114.v1.A.ND3-1
PIENKTFNPEVPAHICSIMALKRINRELQDLNREPSSQYTAGPVGDDLFHWQASIMGPDT
SPFQGGVFFLNVHFPTDYPFKPPKISFTTKIYHPNINGNGSICLDILRSQWSPALTLSKV
LLSISSLLCDPNPDDPLVPDIARMYKTDIKKYKQIATEWTQKHAK

Nucleotide sequence

Length: 901

>KH2012:KH.C12.114.v1.A.ND3-1
AGACAATTTAAAACGAATAAGCCGGAAATTAGAGAACACCAACCATGTATCTATGGTTTT
AAACGGGAAGTATATGAAAACGACAACGACTTCTTGTACGTGGATTCACTTGGTGACCGG
TTTCTAACCAATAGAAAACAAAACCTTTAACCCTGAAGTACCAGCGCACATTTGTTCCAT
CATGGCATTAAAAAGAATAAACAGGGAATTACAAGATTTAAACCGAGAACCCTCATCACA
ATACACTGCTGGACCTGTTGGGGATGATTTGTTTCACTGGCAAGCATCCATCATGGGACC
AGACACATCTCCATTTCAAGGTGGTGTGTTTTTTCTTAATGTACATTTCCCTACAGACTA
CCCGTTTAAGCCACCAAAAATATCATTTACAACTAAAATCTACCACCCCAACATAAACGG
CAATGGAAGCATCTGTCTTGATATCCTGCGCTCGCAATGGTCGCCAGCATTAACTCTTTC
CAAAGTTCTCTTGTCCATCAGTTCATTGCTCTGCGACCCAAATCCAGATGACCCTCTTGT
ACCAGACATTGCACGGATGTATAAAACTGACATTAAAAAGTACAAACAAATTGCCACCGA
GTGGACCCAGAAGCATGCTAAATAAAGTCTCTTGTAGAACCTTTTTTTTATGTAAATAAA
TTCCTCTATCACATATTTTAAATGACTTGATTTAATTGTAAAACATCTGCTAAAAGCAAG
ATTACTGTAAAGTTACATTTATTATATAATGCTTTTATTTTTCCAACTGTACCACGTTAA
TAATTCACGTTAGAGTTGTTTAGCACTAATCATTGTTAAATTTTGTATCGTTTATGTGTT
TGCCCAATCAATTCTGTAAGATTTTTCTTCTGGTATACAAACAAAATTCTCTAGTTTGGA
A

InterProScan

SUPERFAMILY	UBQ-conjugating_enzyme/RWD (IPR016135) - T[16-164] 2.88E-60
Gene3D	UBQ-conjugating_enzyme/RWD (IPR016135) - T[19-165] 5.7E-68
CDD	UBQ-conjugat_E2 (IPR000608) - T[22-160] 1.73451E-68
ProSiteProfiles	UBQ-conjugat_E2 (IPR000608) - T[22-154] 45.567
Pfam	UBQ-conjugat_E2 (IPR000608) - T[23-159] 6.3E-51
ProSitePatterns	UBQ-conjugating_AS (IPR023313) - T[92-107] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
UB2D2_HUMAN	79.452 %	255	1.05E-88
UB2D3_HUMAN	79.452 %	255	8.96E-89
UB2D4_HUMAN	78.767 %	251	3.65E-87