- Transcript 'KH2012:KH.C12.196.v1...'
Transcript Model
Transcript Id
KH2012:KH.C12.196.v1.A.SL2-1
Possible name(s)
ZNF30; ZNF490; ZNF540
Gene model
Location
KhC12 [2,406,430 / 2,411,255]
Amino acid sequence
Length: 736
>KH.C12.196.v1.A.SL2-1
IYYTLTNHSTQNLQIQMNMLAGPNHSGVYTVSINPSVASHVLSQSGTVPVSQLGIITQPN
QQQGQRRIPQIMQTGQVVNLAPARTPQIVKPYTCRHCQKTLSSRYNVVRHEKICKSNTAA
QMQQEQPQPQVPQQQQQQQQPQQTQQQQLEGKTTFQCYFCHKTGFTSQESLTKHQKKCKN
NPANHVQRDRHEHGRRVHICKYCAKEFSTKWNVIRHERLFHSPNDPVIVPHSVANGMAVT
VAAAAPVGKPERYCRFCGNYFSSKYNAIRHEKICTRVNENPSTQDPPASAQKPIQVTTNP
ITAQPMALTLPTTQQHPSNQQQLLQQQLSQQTQQIQQQQPQSNIQTHQQTSLQNQQQQQQ
QQQRQQIIPQQTMVLIEPPTTPYHVCKYCNKQLSTRCDPIGITNTGLQNGQTVATVTGQH
MQLPICSSTTPLGLVTPVMASLPQVAFVQPPLQQLHQTQPMVQHQQPQQQQNHLQPEKLQ
GNNQNHQHQINIQHLNLQQQPRIQQQQQQQHLRQQLQPAQQQQQQQQHHQQQEPTQAGQH
TDRPHGCKYCEKHFATKWYLDQHEKIHTGEADMCKQCGKYFVTRWHLDKHMRVHMSGGST
SSKRLKKEAQSTTTTAMTTDSDNTLVQHVPAIEFQQQILVEPPATSIRQIISSAATVTVS
ADPERGPPSTHVVSASYPHPTDNTQVFLQTINQQQISQESAGVSGSRENTEQQQQQTNQD
KNQQQQHTHQMSISYA
Nucleotide sequence
Length: 2,519
>KH2012:KH.C12.196.v1.A.SL2-1
TCTACTGTAGATATATTACACTTTGACAAACCATAGTACACAAAATCTGCAAATACAAAT
GAACATGCTAGCGGGCCCTAACCACTCTGGTGTGTACACGGTCAGTATCAATCCCTCAGT
GGCTTCACATGTCCTGAGTCAGTCCGGTACAGTACCTGTCTCACAGCTTGGTATTATTAC
CCAGCCCAACCAACAGCAAGGCCAGAGACGCATCCCACAAATAATGCAAACCGGGCAAGT
TGTTAATCTTGCCCCAGCACGAACTCCACAGATTGTAAAGCCCTATACATGCAGACACTG
CCAGAAAACCTTAAGCTCAAGGTACAATGTTGTTCGTCATGAGAAAATCTGCAAGTCCAA
CACAGCTGCCCAAATGCAACAAGAACAACCCCAACCTCAAGTGCCTCAACAACAACAACA
ACAACAGCAGCCGCAACAAACACAACAACAACAACTTGAAGGGAAAACCACATTTCAATG
CTACTTTTGCCACAAAACTGGCTTCACCAGCCAAGAGAGCCTTACCAAGCATCAGAAGAA
ATGCAAGAACAACCCTGCCAACCACGTCCAGCGTGATCGCCATGAACACGGACGACGCGT
GCATATTTGTAAATACTGTGCCAAAGAGTTTAGCACCAAGTGGAATGTGATCAGACACGA
GCGACTTTTCCACAGCCCCAATGACCCCGTGATTGTCCCTCATTCAGTAGCAAATGGAAT
GGCAGTTACTGTGGCTGCTGCTGCTCCTGTTGGCAAACCAGAAAGATATTGTCGTTTCTG
TGGAAACTACTTCAGCTCAAAGTACAATGCGATACGACATGAGAAAATCTGCACCAGGGT
AAATGAAAACCCTTCAACCCAGGATCCCCCTGCCTCTGCTCAAAAACCAATACAGGTAAC
CACCAACCCCATTACTGCACAACCCATGGCTCTTACTCTCCCTACAACACAACAACATCC
CAGTAATCAACAACAACTATTACAACAACAACTCTCACAACAAACACAACAGATTCAACA
ACAACAACCTCAAAGCAACATTCAAACCCATCAACAAACAAGCTTACAAAATCAACAACA
ACAACAACAACAGCAACAAAGACAACAAATTATACCACAACAGACCATGGTACTTATCGA
GCCGCCAACCACCCCCTATCATGTATGCAAATATTGTAACAAGCAGTTATCAACAAGATG
CGATCCGATAGGAATCACCAACACTGGCTTACAGAATGGACAAACTGTGGCAACTGTAAC
AGGGCAACACATGCAGCTTCCTATATGTTCCTCAACCACACCATTAGGACTTGTAACGCC
TGTCATGGCCTCTTTACCACAAGTTGCATTTGTACAACCGCCTCTGCAGCAACTTCATCA
AACCCAACCAATGGTTCAACATCAACAACCACAACAACAACAAAACCATCTTCAACCAGA
GAAGCTACAGGGCAACAACCAAAACCATCAACATCAAATCAACATTCAACACCTAAATTT
ACAACAACAACCGAGAATTCAACAACAACAACAGCAACAACATTTAAGGCAGCAGCTACA
ACCTGCTCAGCAACAACAACAACAACAACAACATCATCAACAACAAGAACCCACGCAGGC
TGGACAACACACAGATCGCCCGCATGGTTGTAAATATTGCGAGAAACATTTCGCAACAAA
GTGGTATCTTGATCAACATGAGAAGATACATACAGGGGAGGCAGATATGTGCAAGCAGTG
CGGAAAATACTTCGTTACAAGGTGGCATTTGGATAAACACATGCGGGTACATATGTCTGG
GGGATCTACTTCATCAAAACGCTTAAAAAAAGAGGCGCAATCGACCACTACGACGGCAAT
GACCACTGATAGTGATAACACATTAGTCCAACATGTACCTGCAATTGAGTTCCAGCAACA
GATTTTAGTTGAACCACCGGCAACTTCTATCAGACAAATCATTTCATCGGCCGCGACTGT
TACAGTGAGCGCTGACCCAGAACGGGGGCCCCCATCCACCCATGTTGTGTCAGCGAGCTA
CCCCCACCCCACGGACAACACCCAGGTTTTTCTACAAACAATAAACCAACAACAAATCAG
TCAAGAATCTGCTGGAGTGAGCGGCTCACGAGAAAACACAGAACAGCAACAACAACAGAC
AAACCAAGATAAAAACCAGCAACAACAACATACACACCAGATGTCTATTTCTTATGCTTA
ATTGTACAACAAAAAACTATGGTGCATATTAGACATACACATGTACATAATAAATGATTA
GTGTATATGAAATTAGCACGATGCTACATAGATAACTAACCAATTATCTGTATTATTATT
GGCCAGTTTCTTAAATAGAAACCATTTTTATCATCGCATTTTTAGAATGAATAAGTACAA
TACTGTTTTCGGACAGGTCGATTTTATTGTAAAATGATTTGTTCCATTTATATTAGGGTG
TTTAATTGTTCATGAAGTCAATGGTGGACTTTTAAATTAAACATATCATGAGACTTGAT
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[90-114] 1.11E-5 - T[150-176] 1.11E-5 - T[196-272] 4.68E-6 - T[543-594] 2.52E-11 |
| SMART |
Znf_C2H2_type (IPR013087) - T[92-112] 29.0 - T[155-176] 170.0 - T[198-221] 0.13 - T[545-567] 0.25 - T[572-594] 0.38 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[198-226] 11.572 - T[252-281] 9.182 - T[545-572] 12.05 - T[572-599] 10.866 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[200-221] . - T[547-567] . - T[574-594] . |
| Protein Name | Identity | Bit Score | e-value |
|---|