- Transcript 'KH2012:KH.C12.196.v1...' >
- Transcript 'KH2012:KH.C12.196.v2...'
Transcript Model
Transcript Id
KH2012:KH.C12.196.v2.A.ND1-1
Possible name(s)
ZNF30; ZNF490; ZNF540
Gene model
Location
KhC12 [2,406,430 / 2,411,801]
Amino acid sequence
Length: 749
>KH.C12.196.v2.A.ND1-1
LLCVLAQFRARDSARVCLHAKYRHSLAAVAAQRVSPFLSCLGCSEFSGGARGVVLKRKML
SERRLRRCRNEPNQQQGQRRIPQIMQTGQVVNLAPARTPQIVKPYTCRHCQKTLSSRYNV
VRHEKICKSNTAAQMQQEQPQPQVPQQQQQQQQPQQTQQQQLEGKTTFQCYFCHKTGFTS
QESLTKHQKKCKNNPANHVQRDRHEHGRRVHICKYCAKEFSTKWNVIRHERLFHSPNDPV
IVPHSVANGMAVTVAAAAPVGKPERYCRFCGNYFSSKYNAIRHEKICTRVNENPSTQDPP
ASAQKPIQVTTNPITAQPMALTLPTTQQHPSNQQQLLQQQLSQQTQQIQQQQPQSNIQTH
QQTSLQNQQQQQQQQQRQQIIPQQTMVLIEPPTTPYHVCKYCNKQLSTRCDPIGITNTGL
QNGQTVATVTGQHMQLPICSSTTPLGLVTPVMASLPQVAFVQPPLQQLHQTQPMVQHQQP
QQQQNHLQPEKLQGNNQNHQHQINIQHLNLQQQPRIQQQQQQQHLRQQLQPAQQQQQQQQ
HHQQQEPTQAGQHTDRPHGCKYCEKHFATKWYLDQHEKIHTGEADMCKQCGKYFVTRWHL
DKHMRVHMSGGSTSSKRLKKEAQSTTTTAMTTDSDNTLVQHVPAIEFQQQILVEPPATSI
RQIISSAATVTVSADPERGPPSTHVVSASYPHPTDNTQVFLQTINQQQISQESAGVSGSR
ENTEQQQQQTNQDKNQQQQHTHQMSISYA
Nucleotide sequence
Length: 2,550
>KH2012:KH.C12.196.v2.A.ND1-1
GTTTGTTGTGTGTACTCGCTCAGTTTAGAGCGCGTGACAGCGCAAGAGTTTGCCTTCATG
CGAAATACCGCCATTCTCTTGCTGCTGTCGCGGCGCAGCGCGTTTCTCCTTTCTTATCAT
GTCTCGGCTGCTCAGAGTTCTCCGGTGGCGCGCGGGGTGTCGTTCTGAAAAGAAAAATGC
TCTCAGAGAGGCGCCTCCGTCGATGCAGGAACGAGCCCAACCAACAGCAAGGCCAGAGAC
GCATCCCACAAATAATGCAAACCGGGCAAGTTGTTAATCTTGCCCCAGCACGAACTCCAC
AGATTGTAAAGCCCTATACATGCAGACACTGCCAGAAAACCTTAAGCTCAAGGTACAATG
TTGTTCGTCATGAGAAAATCTGCAAGTCCAACACAGCTGCCCAAATGCAACAAGAACAAC
CCCAACCTCAAGTGCCTCAACAACAACAACAACAACAGCAGCCGCAACAAACACAACAAC
AACAACTTGAAGGGAAAACCACATTTCAATGCTACTTTTGCCACAAAACTGGCTTCACCA
GCCAAGAGAGCCTTACCAAGCATCAGAAGAAATGCAAGAACAACCCTGCCAACCACGTCC
AGCGTGATCGCCATGAACACGGACGACGCGTGCATATTTGTAAATACTGTGCCAAAGAGT
TTAGCACCAAGTGGAATGTGATCAGACACGAGCGACTTTTCCACAGCCCCAATGACCCCG
TGATTGTCCCTCATTCAGTAGCAAATGGAATGGCAGTTACTGTGGCTGCTGCTGCTCCTG
TTGGCAAACCAGAAAGATATTGTCGTTTCTGTGGAAACTACTTCAGCTCAAAGTACAATG
CGATACGACATGAGAAAATCTGCACCAGGGTAAATGAAAACCCTTCAACCCAGGATCCCC
CTGCCTCTGCTCAAAAACCAATACAGGTAACCACCAACCCCATTACTGCACAACCCATGG
CTCTTACTCTCCCTACAACACAACAACATCCCAGTAATCAACAACAACTATTACAACAAC
AACTCTCACAACAAACACAACAGATTCAACAACAACAACCTCAAAGCAACATTCAAACCC
ATCAACAAACAAGCTTACAAAATCAACAACAACAACAACAACAGCAACAAAGACAACAAA
TTATACCACAACAGACCATGGTACTTATCGAGCCGCCAACCACCCCCTATCATGTATGCA
AATATTGTAACAAGCAGTTATCAACAAGATGCGATCCGATAGGAATCACCAACACTGGCT
TACAGAATGGACAAACTGTGGCAACTGTAACAGGGCAACACATGCAGCTTCCTATATGTT
CCTCAACCACACCATTAGGACTTGTAACGCCTGTCATGGCCTCTTTACCACAAGTTGCAT
TTGTACAACCGCCTCTGCAGCAACTTCATCAAACCCAACCAATGGTTCAACATCAACAAC
CACAACAACAACAAAACCATCTTCAACCAGAGAAGCTACAGGGCAACAACCAAAACCATC
AACATCAAATCAACATTCAACACCTAAATTTACAACAACAACCGAGAATTCAACAACAAC
AACAGCAACAACATTTAAGGCAGCAGCTACAACCTGCTCAGCAACAACAACAACAACAAC
AACATCATCAACAACAAGAACCCACGCAGGCTGGACAACACACAGATCGCCCGCATGGTT
GTAAATATTGCGAGAAACATTTCGCAACAAAGTGGTATCTTGATCAACATGAGAAGATAC
ATACAGGGGAGGCAGATATGTGCAAGCAGTGCGGAAAATACTTCGTTACAAGGTGGCATT
TGGATAAACACATGCGGGTACATATGTCTGGGGGATCTACTTCATCAAAACGCTTAAAAA
AAGAGGCGCAATCGACCACTACGACGGCAATGACCACTGATAGTGATAACACATTAGTCC
AACATGTACCTGCAATTGAGTTCCAGCAACAGATTTTAGTTGAACCACCGGCAACTTCTA
TCAGACAAATCATTTCATCGGCCGCGACTGTTACAGTGAGCGCTGACCCAGAACGGGGGC
CCCCATCCACCCATGTTGTGTCAGCGAGCTACCCCCACCCCACGGACAACACCCAGGTTT
TTCTACAAACAATAAACCAACAACAAATCAGTCAAGAATCTGCTGGAGTGAGCGGCTCAC
GAGAAAACACAGAACAGCAACAACAACAGACAAACCAAGATAAAAACCAGCAACAACAAC
ATACACACCAGATGTCTATTTCTTATGCTTAATTGTACAACAAAAAACTATGGTGCATAT
TAGACATACACATGTACATAATAAATGATTAGTGTATATGAAATTAGCACGATGCTACAT
AGATAACTAACCAATTATCTGTATTATTATTGGCCAGTTTCTTAAATAGAAACCATTTTT
ATCATCGCATTTTTAGAATGAATAAGTACAATACTGTTTTCGGACAGGTCGATTTTATTG
TAAAATGATTTGTTCCATTTATATTAGGGTGTTTAATTGTTCATGAAGTCAATGGTGGAC
TTTTAAATTAAACATATCATGAGACTTGAT
| SMART |
Znf_C2H2_type (IPR013087) - T[105-125] 29.0 - T[168-189] 170.0 - T[211-234] 0.13 - T[558-580] 0.25 - T[585-607] 0.38 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[209-285] 5.15E-6 - T[556-607] 2.63E-11 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[211-239] 11.572 - T[265-294] 9.182 - T[558-585] 12.05 - T[585-612] 10.866 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[213-234] . - T[560-580] . - T[587-607] . |
| Protein Name | Identity | Bit Score | e-value |
|---|