- Transcript 'KH2012:KH.L65.6.v1.A...' >
- Clone 'cima836891' >
- Transcript 'KH2012:KH.C12.222.v1...'
Transcript Model
Transcript Id
KH2012:KH.C12.222.v1.A.SL1-1
Possible name(s)
ZNF235; ZNF648; ZSCAN22
Gene model
Location
KhC12 [1,070,144 / 1,074,791]
Amino acid sequence
Length: 507
>KH.C12.222.v1.A.SL1-1
IVKDNKVTRSYLMAPVNVEQVCPISCELKSEALKHIDSVCFTRYVKTCSILLQPTILKHN
IYILLNRQTESTKFVTRNRNNPFPFCGKAYANEVDLHQHMTRHTSRSSDSIVTWATKRKK
TGRARHVNKVPGIRPHMCETCGKRFSLLENMHRHQLIHSNDRPFKCPHCSKNFRLSQHLK
EHIRIHTGEKPFKCDICGHAFCQISNLKSHQKTHSKEKSFSCDICGKGFRRSFTLKQHKL
IHQRNKSFNATDGATKPKCINKIEDTDKEFRRDESYVFTSSDRSRTNDTMTSSNAKSVTS
NPNDVAEITSTSTVVSPTWSENSVPNYFGNQAHGGATEMWPELNALARLTCQQHFSHNRG
HCVSKDENNNTHSEQKVLGDYKWKRDLSREWICDERIKIQETNNSEENLSPVSMVTSQTS
CDVISNSEIKTSRKISFDDESRNPWLLHGNHALNSLAGFVSVPGIPPPSATSLVGYNPFG
LVPMVEWQPVITGWRSVLDGNVYAVAD
Nucleotide sequence
Length: 1,993
>KH2012:KH.C12.222.v1.A.SL1-1
ATTACTGTTTCATATTTGAATCGTTAAGGATAATAAAGTGACGCGTTCATACTTAATGGC
ACCCGTTAATGTGGAACAAGTCTGTCCGATTTCTTGTGAACTAAAAAGTGAAGCATTAAA
ACATATTGATTCGGTTTGTTTTACCAGGTATGTTAAAACATGTTCCATCTTACTCCAACC
TACTATATTAAAACACAACATTTATATTTTATTAAACAGACAAACAGAAAGTACGAAGTT
TGTAACCCGTAACCGTAACAACCCATTTCCTTTTTGTGGAAAAGCGTATGCAAATGAAGT
CGACTTACATCAACACATGACACGGCATACGTCACGGTCGAGTGATTCTATAGTCACGTG
GGCTACGAAGCGGAAGAAAACCGGCAGAGCTCGCCACGTAAATAAAGTGCCAGGCATTCG
ACCACATATGTGCGAGACATGCGGGAAACGGTTTTCGCTGCTTGAAAACATGCACAGACA
CCAACTTATACATTCGAACGACCGCCCGTTTAAATGCCCACACTGCAGTAAAAACTTTCG
GCTGTCGCAACACCTAAAAGAACACATCAGAATACATACAGGTGAGAAGCCGTTCAAATG
CGACATCTGTGGACACGCATTTTGTCAGATTTCGAACCTTAAGTCGCACCAGAAGACACA
CAGTAAAGAGAAGAGTTTTAGTTGCGATATTTGCGGGAAAGGATTCAGGCGTTCATTTAC
ACTCAAACAACACAAACTAATCCATCAAAGAAATAAATCGTTCAATGCGACCGACGGTGC
AACAAAACCAAAATGCATAAACAAGATTGAAGACACGGATAAGGAATTCAGAAGAGATGA
AAGTTATGTTTTCACCTCAAGCGATCGAAGTCGAACAAATGACACAATGACGTCATCAAA
TGCAAAATCTGTGACGTCAAACCCGAATGACGTAGCGGAAATTACGTCAACCTCGACTGT
GGTGTCGCCAACGTGGAGCGAAAATTCGGTGCCGAATTATTTCGGCAACCAGGCGCATGG
TGGCGCTACGGAGATGTGGCCGGAATTAAATGCCCTGGCTCGCTTGACGTGCCAGCAACA
TTTCTCACATAATAGGGGTCACTGTGTAAGCAAGGACGAAAACAATAATACCCATAGCGA
GCAGAAGGTGCTTGGAGACTACAAATGGAAGCGAGACCTTAGCCGTGAGTGGATATGCGA
CGAACGAATAAAGATACAAGAAACCAATAATTCCGAGGAAAACTTATCCCCTGTCTCGAT
GGTGACGTCACAAACGTCTTGTGACGTCATAAGCAACTCCGAAATAAAAACATCCCGAAA
AATCTCGTTCGACGACGAAAGCAGAAACCCGTGGTTATTACACGGAAATCACGCGCTGAA
TAGTTTGGCCGGTTTTGTATCGGTTCCGGGGATTCCCCCGCCCTCTGCTACGTCACTGGT
AGGGTATAATCCTTTCGGTTTGGTTCCAATGGTAGAATGGCAGCCTGTTATTACTGGCTG
GAGGTCTGTGTTGGATGGGAACGTATATGCGGTGGCAGATTAATGAATGAAAAATATTAA
AAAAAAAACAGAAATGAACAAAAATTCATTTTGGTCACTCGCGAGCAAAAAAAAGTGTTA
TAATATGGTTGTGTCCATTGTGCGCCATAAGTATATGGTGGCTTAACACACCTCGTTTTT
TATTTGGTTCCAGTTTAAATCTGGGCTGCTAGAATCACATAATGATACGAATGGTAACAT
ATATATAAAGCAACTGTTTCCAACATATCGTGTGGAACAGAATATATATGTTTCAGTTTG
CCCATTTCTGTTTCAAGTATCCTCGTACAGTTTGTAATTATTCTTTCTATTCTTTCATTG
CAGCTACCATGAAATAACCTTATACTTGCATTAACGCTTAACATTAGAGTCACAACTATA
TTTTTTCACCCTAATAAACTACTTTAACGCAATTTTATTCTGCATTATAAGGTATTAAGA
CAATTTAAAGCCA
| SMART |
Znf_C2H2_type (IPR013087) - T[84-103] 30.0 - T[136-158] 0.37 - T[164-186] 0.0064 - T[192-214] 0.0056 - T[220-242] 0.0045 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[134-186] 1.88E-14 - T[173-229] 2.76E-21 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[136-163] 13.692 - T[164-191] 16.581 - T[192-219] 14.357 - T[220-247] 12.695 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[138-158] . - T[166-186] . - T[194-214] . - T[222-242] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZSC22_HUMAN | 36.364 % | 130 | 6.01E-33 |
| ZN235_HUMAN | 39.024 % | 130 | 4.88E-32 |
| ZN648_HUMAN | 34.956 % | 132 | 5.15E-33 |