- Transcript 'KH2012:KH.C12.222.v2...'
Transcript Model
Transcript Id
KH2012:KH.C12.222.v2.A.ND2-1
Possible name(s)
ZNF235; ZNF648; ZSCAN22
Gene model
Location
KhC12 [1,070,144 / 1,073,411]
Amino acid sequence
Length: 393
>KH.C12.222.v2.A.ND2-1
YVIMDTKANKTKVNKVPGIRPHMCETCGKRFSLLENMHRHQLIHSNDRPFKCPHCSKNFR
LSQHLKEHIRIHTGEKPFKCDICGHAFCQISNLKSHQKTHSKEKSFSCDICGKGFRRSFT
LKQHKLIHQRNKSFNATDGATKPKCINKIEDTDKEFRRDESYVFTSSDRSRTNDTMTSSN
AKSVTSNPNDVAEITSTSTVVSPTWSENSVPNYFGNQAHGGATEMWPELNALARLTCQQH
FSHNRGHCVSKDENNNTHSEQKVLGDYKWKRDLSREWICDERIKIQETNNSEENLSPVSM
VTSQTSCDVISNSEIKTSRKISFDDESRNPWLLHGNHALNSLAGFVSVPGIPPPSATSLV
GYNPFGLVPMVEWQPVITGWRSVLDGNVYAVAD
Nucleotide sequence
Length: 1,690
>KH2012:KH.C12.222.v2.A.ND2-1
GGTAGACATAAAGGTGCCAGCAATAGTAACGGTTAATTAATGATTTTAATTTGGTTAGTA
TGTTATTATGGATACGAAAGCAAACAAAACCAAAGTAAATAAAGTGCCAGGCATTCGACC
ACATATGTGCGAGACATGCGGGAAACGGTTTTCGCTGCTTGAAAACATGCACAGACACCA
ACTTATACATTCGAACGACCGCCCGTTTAAATGCCCACACTGCAGTAAAAACTTTCGGCT
GTCGCAACACCTAAAAGAACACATCAGAATACATACAGGTGAGAAGCCGTTCAAATGCGA
CATCTGTGGACACGCATTTTGTCAGATTTCGAACCTTAAGTCGCACCAGAAGACACACAG
TAAAGAGAAGAGTTTTAGTTGCGATATTTGCGGGAAAGGATTCAGGCGTTCATTTACACT
CAAACAACACAAACTAATCCATCAAAGAAATAAATCGTTCAATGCGACCGACGGTGCAAC
AAAACCAAAATGCATAAACAAGATTGAAGACACGGATAAGGAATTCAGAAGAGATGAAAG
TTATGTTTTCACCTCAAGCGATCGAAGTCGAACAAATGACACAATGACGTCATCAAATGC
AAAATCTGTGACGTCAAACCCGAATGACGTAGCGGAAATTACGTCAACCTCGACTGTGGT
GTCGCCAACGTGGAGCGAAAATTCGGTGCCGAATTATTTCGGCAACCAGGCGCATGGTGG
CGCTACGGAGATGTGGCCGGAATTAAATGCCCTGGCTCGCTTGACGTGCCAGCAACATTT
CTCACATAATAGGGGTCACTGTGTAAGCAAGGACGAAAACAATAATACCCATAGCGAGCA
GAAGGTGCTTGGAGACTACAAATGGAAGCGAGACCTTAGCCGTGAGTGGATATGCGACGA
ACGAATAAAGATACAAGAAACCAATAATTCCGAGGAAAACTTATCCCCTGTCTCGATGGT
GACGTCACAAACGTCTTGTGACGTCATAAGCAACTCCGAAATAAAAACATCCCGAAAAAT
CTCGTTCGACGACGAAAGCAGAAACCCGTGGTTATTACACGGAAATCACGCGCTGAATAG
TTTGGCCGGTTTTGTATCGGTTCCGGGGATTCCCCCGCCCTCTGCTACGTCACTGGTAGG
GTATAATCCTTTCGGTTTGGTTCCAATGGTAGAATGGCAGCCTGTTATTACTGGCTGGAG
GTCTGTGTTGGATGGGAACGTATATGCGGTGGCAGATTAATGAATGAAAAATATTAAAAA
AAAAACAGAAATGAACAAAAATTCATTTTGGTCACTCGCGAGCAAAAAAAAGTGTTATAA
TATGGTTGTGTCCATTGTGCGCCATAAGTATATGGTGGCTTAACACACCTCGTTTTTTAT
TTGGTTCCAGTTTAAATCTGGGCTGCTAGAATCACATAATGATACGAATGGTAACATATA
TATAAAGCAACTGTTTCCAACATATCGTGTGGAACAGAATATATATGTTTCAGTTTGCCC
ATTTCTGTTTCAAGTATCCTCGTACAGTTTGTAATTATTCTTTCTATTCTTTCATTGCAG
CTACCATGAAATAACCTTATACTTGCATTAACGCTTAACATTAGAGTCACAACTATATTT
TTTCACCCTAATAAACTACTTTAACGCAATTTTATTCTGCATTATAAGGTATTAAGACAA
TTTAAAGCCA
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[20-72] 7.81E-15 - T[59-115] 2.02E-21 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[22-49] 13.692 - T[50-77] 16.581 - T[78-105] 14.357 - T[106-133] 12.695 |
| SMART |
Znf_C2H2_type (IPR013087) - T[22-44] 0.37 - T[50-72] 0.0064 - T[78-100] 0.0056 - T[106-128] 0.0045 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[24-44] . - T[52-72] . - T[80-100] . - T[108-128] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZSC22_HUMAN | 44.068 % | 124 | 1.42E-31 |
| ZN235_HUMAN | 42.446 % | 124 | 5.18E-31 |
| ZN233_HUMAN | 49.55 % | 126 | 1.11E-31 |