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  1. Transcript 'KH2012:KH.C1.513.v1....'
  2. Transcript 'Haaura.CG.MTP2014.S9...'
  3. Transcript 'Haaura.CG.MTP2014.S1...'
  4. Transcript 'KH2012:KH.C3.61.v1.A...'
  5. Transcript 'KH2012:KH.C12.233.v1...'

Transcript Model

Transcript Id

KH2012:KH.C12.233.v1.B.SL2-1

Possible name(s)

CD53; TSPAN11; TSPAN9

Location

KhC12 [1,354,702 / 1,359,441]

Sequences

Amino acid sequence

Length: 133

>KH.C12.233.v1.B.SL2-1
FFTIVLVIFIAEIVGAILIYVYYPKAKDLALQSMQNYNTTTKQPWDILQTTFKCCGFTNY
SDWGSTIPSTCCSDAASPCSPSMTTFYPLGCEAAIRKYFWIIGGIGIGIIVFEILAMIFA
CCLFQNIGDYEMA

Nucleotide sequence

Length: 1,717

>KH2012:KH.C12.233.v1.B.SL2-1
GCGGATTTTAATATTTATTTAAAATCGGTAATTTTGGACAAAAACGAGAAAAATGGAAAG
CAAAGGTTTGAACTGTTGCAAGTATTTGATGTTTCTATTCAACTTACTAATATTCTTGTG
CGGGTGCGTTCTTCTTGGTCTGAGTGTATGGGCGTACGTGAATGCTGACTCTTTCAAAAA
GATCATATCCTCCGACCCAGTTATATTCAACTCTCTCATTGTTCTTATTGCCGTTGGAGC
AGTGCTGATTGTAGCTGGTTTCTTCGGTTGTCTTGGAGCAATACAAGAAAGCAAATGCCT
TTTGGGAACGGTGATATTATAAAACAAAACATTACTAACTAGTTTTAGCGCGGTATTTTT
TTTTCATTTAATGATTGAAACTCGTTATCCTATAGCGTGACGAGCCAATGGCGGTCCTGT
TTTTTACAACTAGGGCCACTTACAAGTTACCACGAATGTATCTTTGTTTTAATTTGTTTT
ACAGAATTTTGGCTTTTTTTAAACGTGTATAGACTATAGCTCATGGCCTACTAGAGATAT
CTTTAGTAGGCCGAGACTAGCTTAACGATCTTCTTTTATTAGTTTTTTACCATCGTGTTG
GTCATATTCATTGCCGAAATAGTAGGAGCCATCTTAATCTATGTGTATTACCCGAAAGCA
AAAGACCTTGCATTACAAAGCATGCAAAATTACAACACAACAACAAAGCAACCATGGGAC
ATCCTACAAACAACATTTAAATGCTGCGGCTTTACCAACTACAGCGACTGGGGTTCTACC
ATACCAAGTACATGCTGTAGTGATGCAGCGTCTCCATGTTCACCATCAATGACAACGTTT
TATCCGCTTGGCTGTGAAGCTGCGATTCGTAAATACTTCTGGATAATTGGGGGAATCGGT
ATCGGCATTATCGTATTCGAGATATTGGCGATGATTTTCGCATGCTGCCTCTTTCAAAAC
ATTGGAGATTATGAAATGGCTTAAGCAAATTGTTAAAAAACATCATAATTTGGTACTTTT
ACCATTTAGGCCTAAATGCCTTTGAACATAGTCACTTTTATCAGCAGTATCCATTCTTGT
TTATTGCCTATAAGTATAGAACGTTATGTCTAAACGAATTAAAACACCCGTTTCTCGTTT
ATAATGTCAATTTTCCTTTCCCATTACCGTATATACACACATTATAATAGGCCTGTTAAA
TTTTTCGTGTTTGCTAAATAATGCAGCTTTTAAATTTTTTGTTCAAACTAATTTATAGGT
TTAAGCCGAATCTTGTTGCACTAAGTTAGTTTGACTATACATTATTTTAACTTTCAAAAT
GGAGTTTACAGGTATAAAAATTGGTCTGAATTAATTTAAGTAAACACCAGTAAATCAAAA
TGAGGCTGCAAAAGTTAAATGTAACAATTTTAGCTTATATCATTTATATTTTTTGGCCCA
AACTTTACAACAGCCCTTAAAGCCTTAATATGTGTTCACATCACAGTTTCAAACACTTTA
TATTTTGCATCTAATAATCAAGGTTTACCAAATTGCAATCATGAGTTAGTTCAATCGTGC
AATAATAAAACTTATGTACAAATTCGTTACATTGAATAATATGTAATTATGGATAACACG
AAGCACCTTTAGCCCATAATAACCAAATATCCCGATCGTGTTTTAAACAATTTAAAACGG
TCTATGGGAGTCGTGAGAATACAGTTTTATAATTCTT

InterProScan

Pfam
Tetraspanin/Peripherin (IPR018499) - T[1-125] 5.1E-21
Gene3D
Tetraspanin_EC2_sf (IPR008952) - T[24-97] 4.7E-13
SUPERFAMILY
Tetraspanin_EC2_sf (IPR008952) - T[32-99] 2.22E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TSN11_HUMAN 28.931 % 76.6 5.89E-18
TSN9_HUMAN 29.365 % 70.9 8.1E-16
CD63_HUMAN 30.714 % 71.6 3.7E-16





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