- Clone 'cieg017o06' >
- Transcript 'Haaura.CG.MTP2014.S9...' >
- Transcript 'Phfumi.CG.MTP2014.S4...' >
- Transcript 'KH2012:KH.C12.233.v2...'
Transcript Model
Transcript Id
KH2012:KH.C12.233.v2.A.SL1-1
Possible name(s)
CD53; TSPAN11; TSPAN9
Gene model
Location
KhC12 [1,354,669 / 1,359,441]
Amino acid sequence
Length: 226
>KH.C12.233.v2.A.SL1-1
FWTKTRKMESKGLNCCKYLMFLFNLLIFLCGCVLLGLSVWAYVNADSFKKIISSDPVIFN
SLIVLIAVGAVLIVAGFFGCLGAIQESKCLLGTFFTIVLVIFIAEIVGAILIYVYYPKAK
DLALQSMQNYNTTTKQPWDILQTTFKCCGFTNYSDWGSTIPSTCCSDAASPCSPSMTTFY
PLGCEAAIRKYFWIIGGIGIGIIVFEILAMIFACCLFQNIGDYEMA
Nucleotide sequence
Length: 1,478
>KH2012:KH.C12.233.v2.A.SL1-1
AGTGTTCGTTTATGTTAATATTTAACAAAATAGGCGGATTTTAATATTTATTTAAAATCG
GTAATTTTGGACAAAAACGAGAAAAATGGAAAGCAAAGGTTTGAACTGTTGCAAGTATTT
GATGTTTCTATTCAACTTACTAATATTCTTGTGCGGGTGCGTTCTTCTTGGTCTGAGTGT
ATGGGCGTACGTGAATGCTGACTCTTTCAAAAAGATCATATCCTCCGACCCAGTTATATT
CAACTCTCTCATTGTTCTTATTGCCGTTGGAGCAGTGCTGATTGTAGCTGGTTTCTTCGG
TTGTCTTGGAGCAATACAAGAAAGCAAATGCCTTTTGGGAACGTTTTTTACCATCGTGTT
GGTCATATTCATTGCCGAAATAGTAGGAGCCATCTTAATCTATGTGTATTACCCGAAAGC
AAAAGACCTTGCATTACAAAGCATGCAAAATTACAACACAACAACAAAGCAACCATGGGA
CATCCTACAAACAACATTTAAATGCTGCGGCTTTACCAACTACAGCGACTGGGGTTCTAC
CATACCAAGTACATGCTGTAGTGATGCAGCGTCTCCATGTTCACCATCAATGACAACGTT
TTATCCGCTTGGCTGTGAAGCTGCGATTCGTAAATACTTCTGGATAATTGGGGGAATCGG
TATCGGCATTATCGTATTCGAGATATTGGCGATGATTTTCGCATGCTGCCTCTTTCAAAA
CATTGGAGATTATGAAATGGCTTAAGCAAATTGTTAAAAAACATCATAATTTGGTACTTT
TACCATTTAGGCCTAAATGCCTTTGAACATAGTCACTTTTATCAGCAGTATCCATTCTTG
TTTATTGCCTATAAGTATAGAACGTTATGTCTAAACGAATTAAAACACCCGTTTCTCGTT
TATAATGTCAATTTTCCTTTCCCATTACCGTATATACACACATTATAATAGGCCTGTTAA
ATTTTTCGTGTTTGCTAAATAATGCAGCTTTTAAATTTTTTGTTCAAACTAATTTATAGG
TTTAAGCCGAATCTTGTTGCACTAAGTTAGTTTGACTATACATTATTTTAACTTTCAAAA
TGGAGTTTACAGGTATAAAAATTGGTCTGAATTAATTTAAGTAAACACCAGTAAATCAAA
ATGAGGCTGCAAAAGTTAAATGTAACAATTTTAGCTTATATCATTTATATTTTTTGGCCC
AAACTTTACAACAGCCCTTAAAGCCTTAATATGTGTTCACATCACAGTTTCAAACACTTT
ATATTTTGCATCTAATAATCAAGGTTTACCAAATTGCAATCATGAGTTAGTTCAATCGTG
CAATAATAAAACTTATGTACAAATTCGTTACATTGAATAATATGTAATTATGGATAACAC
GAAGCACCTTTAGCCCATAATAACCAAATATCCCGATCGTGTTTTAAACAATTTAAAACG
GTCTATGGGAGTCGTGAGAATACAGTTTTATAATTCTT
| PIRSF |
Tetraspanin (IPR000301) - T[7-226] 1.1E-50 |
| Pfam |
Tetraspanin/Peripherin (IPR018499) - T[17-218] 3.7E-43 |
| PRINTS |
Tetraspanin (IPR000301) - T[18-41] 3.5E-46 - T[58-84] 3.5E-46 - T[85-113] 3.5E-46 - T[194-220] 3.5E-46 |
| ProSitePatterns |
Tetraspanin_CS (IPR018503) - T[69-91] . |
| Gene3D |
Tetraspanin_EC2_sf (IPR008952) - T[118-189] 1.7E-12 |
| SUPERFAMILY |
Tetraspanin_EC2_sf (IPR008952) - T[125-192] 7.72E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TSN11_HUMAN | 28.814 % | 111 | 7.49E-30 |
| TSN9_HUMAN | 38.261 % | 142 | 2.98E-42 |
| CD53_HUMAN | 34.703 % | 113 | 4.44E-31 |