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  1. Transcript 'KH2012:KH.C12.233.v2...'

Transcript Model

Transcript Id

KH2012:KH.C12.233.v2.A.SL2-1

Possible name(s)

CD53; TSPAN11; TSPAN9

Location

KhC12 [1,354,702 / 1,359,441]

Sequences

Amino acid sequence

Length: 226

>KH.C12.233.v2.A.SL2-1
FWTKTRKMESKGLNCCKYLMFLFNLLIFLCGCVLLGLSVWAYVNADSFKKIISSDPVIFN
SLIVLIAVGAVLIVAGFFGCLGAIQESKCLLGTFFTIVLVIFIAEIVGAILIYVYYPKAK
DLALQSMQNYNTTTKQPWDILQTTFKCCGFTNYSDWGSTIPSTCCSDAASPCSPSMTTFY
PLGCEAAIRKYFWIIGGIGIGIIVFEILAMIFACCLFQNIGDYEMA

Nucleotide sequence

Length: 1,445

>KH2012:KH.C12.233.v2.A.SL2-1
GCGGATTTTAATATTTATTTAAAATCGGTAATTTTGGACAAAAACGAGAAAAATGGAAAG
CAAAGGTTTGAACTGTTGCAAGTATTTGATGTTTCTATTCAACTTACTAATATTCTTGTG
CGGGTGCGTTCTTCTTGGTCTGAGTGTATGGGCGTACGTGAATGCTGACTCTTTCAAAAA
GATCATATCCTCCGACCCAGTTATATTCAACTCTCTCATTGTTCTTATTGCCGTTGGAGC
AGTGCTGATTGTAGCTGGTTTCTTCGGTTGTCTTGGAGCAATACAAGAAAGCAAATGCCT
TTTGGGAACGTTTTTTACCATCGTGTTGGTCATATTCATTGCCGAAATAGTAGGAGCCAT
CTTAATCTATGTGTATTACCCGAAAGCAAAAGACCTTGCATTACAAAGCATGCAAAATTA
CAACACAACAACAAAGCAACCATGGGACATCCTACAAACAACATTTAAATGCTGCGGCTT
TACCAACTACAGCGACTGGGGTTCTACCATACCAAGTACATGCTGTAGTGATGCAGCGTC
TCCATGTTCACCATCAATGACAACGTTTTATCCGCTTGGCTGTGAAGCTGCGATTCGTAA
ATACTTCTGGATAATTGGGGGAATCGGTATCGGCATTATCGTATTCGAGATATTGGCGAT
GATTTTCGCATGCTGCCTCTTTCAAAACATTGGAGATTATGAAATGGCTTAAGCAAATTG
TTAAAAAACATCATAATTTGGTACTTTTACCATTTAGGCCTAAATGCCTTTGAACATAGT
CACTTTTATCAGCAGTATCCATTCTTGTTTATTGCCTATAAGTATAGAACGTTATGTCTA
AACGAATTAAAACACCCGTTTCTCGTTTATAATGTCAATTTTCCTTTCCCATTACCGTAT
ATACACACATTATAATAGGCCTGTTAAATTTTTCGTGTTTGCTAAATAATGCAGCTTTTA
AATTTTTTGTTCAAACTAATTTATAGGTTTAAGCCGAATCTTGTTGCACTAAGTTAGTTT
GACTATACATTATTTTAACTTTCAAAATGGAGTTTACAGGTATAAAAATTGGTCTGAATT
AATTTAAGTAAACACCAGTAAATCAAAATGAGGCTGCAAAAGTTAAATGTAACAATTTTA
GCTTATATCATTTATATTTTTTGGCCCAAACTTTACAACAGCCCTTAAAGCCTTAATATG
TGTTCACATCACAGTTTCAAACACTTTATATTTTGCATCTAATAATCAAGGTTTACCAAA
TTGCAATCATGAGTTAGTTCAATCGTGCAATAATAAAACTTATGTACAAATTCGTTACAT
TGAATAATATGTAATTATGGATAACACGAAGCACCTTTAGCCCATAATAACCAAATATCC
CGATCGTGTTTTAAACAATTTAAAACGGTCTATGGGAGTCGTGAGAATACAGTTTTATAA
TTCTT

InterProScan

PIRSF
Tetraspanin (IPR000301) - T[7-226] 1.1E-50
Pfam
Tetraspanin/Peripherin (IPR018499) - T[17-218] 3.7E-43
PRINTS
Tetraspanin (IPR000301) - T[18-41] 3.5E-46 - T[58-84] 3.5E-46 - T[85-113] 3.5E-46 - T[194-220] 3.5E-46
ProSitePatterns
Tetraspanin_CS (IPR018503) - T[69-91] .
Gene3D
Tetraspanin_EC2_sf (IPR008952) - T[118-189] 1.7E-12
SUPERFAMILY
Tetraspanin_EC2_sf (IPR008952) - T[125-192] 7.72E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TSN11_HUMAN 28.814 % 111 7.49E-30
TSN9_HUMAN 38.261 % 142 2.98E-42
CD53_HUMAN 34.703 % 113 4.44E-31





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