Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 434

>KH.C12.26.v1.A.SL1-1
KHRTLKVNMLQFTPPVVKELLGWKRGEMSAQDEKFAEKAIKSLVKKLKKSGGLEDLKKAV
TKQSIDTKCVKIPRSLDGRLQVSHKKSLPHVLYCRLWRWPDLRNHHELRPVEKCEYAFQL
KRDEVCVNPYHYTRVETPALPPILVPRQTEPIPAEFPPLDDWSIVPENATFEPSMQPSGN
FTIPESPPPGYMSEDSEFSESGSNLSSPGPPTTFSDGTTSASPSSGSDDVQSVAYHEPPH
WCSISYYELNQRIGEPFHATQSSLTVDGFTDPSNSERFCLGLLSNINRTQHVEITRRHVG
KGVRLYYIAGEVFAECLSDSAIFVQSPNCNQRYGWHPATVVKIPPGCHLKIFNNQEFAAL
LSQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQHVTSTPCWIEMHLNGPLQWLDKVL
QQMGAPHIPCSSMS

Nucleotide sequence

Length: 2,745

>KH2012:KH.C12.26.v1.A.SL1-1
TTGTTACTACCACCACATAGGTGAAAACTGTTGTTTCATTTTCGAGTTGGTTTTAATGCC
AGGCAAACGTTGGATATTGAATATCTATTGAAAACATCGAACATTGAAAGTAAATATGTT
GCAATTCACTCCTCCAGTTGTTAAAGAACTCCTGGGGTGGAAGAGAGGGGAAATGTCAGC
TCAGGATGAAAAGTTTGCTGAGAAAGCAATCAAAAGTTTGGTAAAAAAGCTCAAGAAAAG
TGGGGGGTTGGAGGATCTGAAGAAGGCTGTGACGAAGCAATCAATCGATACAAAGTGTGT
GAAGATACCTCGGTCACTAGATGGCAGGCTGCAGGTTTCCCACAAGAAGTCCCTCCCCCA
TGTTTTATACTGTAGGTTGTGGAGGTGGCCGGACCTGAGGAACCATCATGAGTTACGACC
GGTGGAGAAATGTGAATATGCTTTCCAACTAAAGAGAGATGAGGTATGCGTGAACCCGTA
CCATTACACGCGTGTAGAAACACCCGCCCTTCCCCCAATATTGGTCCCACGGCAAACGGA
ACCAATACCTGCCGAGTTCCCACCATTGGATGATTGGTCTATTGTTCCTGAGAATGCTAC
TTTTGAACCAAGTATGCAACCATCAGGTAACTTCACGATACCAGAGAGCCCACCACCAGG
CTACATGAGCGAGGATAGCGAGTTCAGTGAATCGGGTTCCAACTTATCAAGTCCCGGCCC
TCCAACTACATTCTCAGATGGAACAACGAGCGCTTCCCCCTCCTCAGGCAGCGATGATGT
TCAATCTGTTGCGTATCATGAACCCCCACATTGGTGTTCCATATCTTACTATGAACTTAA
TCAAAGAATAGGTGAGCCCTTCCACGCCACTCAATCCTCGCTTACCGTCGACGGATTCAC
CGATCCTTCAAACTCGGAGAGGTTTTGTCTCGGACTTCTTTCCAACATCAACCGAACACA
GCATGTTGAGATAACTAGGAGACACGTGGGGAAAGGCGTTCGTTTATATTACATCGCTGG
TGAAGTATTCGCTGAGTGTTTGAGTGACAGCGCGATATTCGTGCAGAGTCCGAACTGTAA
CCAGCGATACGGATGGCACCCAGCTACTGTTGTTAAGATACCACCTGGATGTCACCTTAA
AATATTCAATAACCAGGAATTTGCGGCTCTTTTGTCCCAATCAGTAAACCAGGGATTTGA
GGCAGTTTACCAACTAACTAGGATGTGCACGATTCGTATGAGTTTTGTTAAAGGTTGGGG
AGCTGAGTACCGAAGACAACATGTCACTTCCACCCCATGTTGGATAGAAATGCATCTGAA
TGGTCCACTGCAGTGGTTGGACAAAGTGTTGCAGCAGATGGGAGCTCCACATATACCATG
TTCCAGCATGTCTTGATGATGGAACTTGTACATAAGCATGTCTTGCACCAGGATTGGTAA
AAACTTCATATTTGAATATTTCACTTTGTAAATATCGTTGCACTACTTGTCATATATCCA
TCATGCCAATTATGTTTTACCACCAGCCAAAAGTATTAGGGTTTAATGAGAATGTTTAAA
AGCATATCGTTGAAGTTTTTATGATATTTTAACACATGATATTAGAACACGGGTTCTTAT
ACTTTAACACACAACCATTTTAACAATGTCACAAAACCCACATTTCGCTCAGGAAAACAT
GTTTAGTCCAAACTTATATGACAGTTTATCATCTTTCCTTATGAACCATCCGATGGAGAA
ACACCTCCAAGCATAAGAACCTATGTTCTACAAAATATGTTGTTAATATTATGGCCCTGT
TTCAATGCAAACAACAAACCGTATATTCATCTCAAATTGTTCTTTATTTTAAACATGGTT
TAGAACCTTAATCCATCTTTAGTGAAATGAAGACAATTGTGTTATAAATACCTACGGAAT
GTTATGTTGTATGGAAACTGACCAGAAATCCCAAGTTTTATTCATCGATAATTACTTCTG
TCTTCTTTAACTAAAATATCAAGTGAAAATTTCTTTGTAGATTTTGTGTTTGTTCAACAA
CAAATAACGCTTGAACGCCAATCTACAAAACATTGCCCAACTATACACTTTACGTACGTT
GTAATGTTACTGGCGAACTTAATTTAAAAGTTCCGATTTTAAATCCAATGTTTTTAATGC
AGCATCAACAAGTAACTAATATTTTATTTTTACATCATTTTTATTGTTTTTACTTGTGAG
CAAAACTAATGAAGCAATTTGTCAATCTGAGTACATTTATTCAAATTTATAGTACGTATG
TGGTAAATCGTAAGTCACCCAGCCATGAAAGTTTCATTTATTACAATTGAATTTTTAGTA
CATATGTTTCAAACTATGTTTACTACTATTTTGAATTGAGCATAATATTTTTCAGCGATT
TTTACAAATGAAATTTGACATAAATTTGTTAAAACCTATGTTTTGGCCGCAATGCGGGGA
CTTGAGTTTTATTAAATTTTAGTAAAATTTGACTTTTACCTGAATCCTATGAAATATTTG
TTTTCATATCAAAGGTTGAACATCCAAGTAATTATGTTTGTGTTGAATGCAACCTTTGTT
TCCATTGTTTCATATGGTTGACTCACATTGTTTATTGCACTATTAACACTACTGTACATA
ATTTCCTATTAACACGTCTTGCAAGTGCCTACAATAAATCATCTTTTTTATTTTAAATTT
ATGTTTTGTGTATTTGTGCATCTTATACACGTGGCAGCGGCAAAA

InterProScan

Gene3D	SMAD_MH1_sf (IPR036578) - T[6-149] 1.0E-63
PANTHER	Dwarfin (IPR013790) - T[7-434] 8.0E-230
ProSiteProfiles	MAD_homology_MH1 (IPR013019) - T[15-141] 35.44
SUPERFAMILY	SMAD_MH1_sf (IPR036578) - T[16-136] 1.7E-46
SMART	MAD_homology1_Dwarfin-type (IPR003619) - T[31-139] 6.3E-55
Pfam	MAD_homology1_Dwarfin-type (IPR003619) - T[37-136] 5.2E-40
SUPERFAMILY	SMAD_FHA_dom_sf (IPR008984) - T[207-424] 2.73E-92
Gene3D	SMAD-like_dom_sf (IPR017855) - T[232-434] 5.3E-96
SMART	SMAD_dom_Dwarfin-type (IPR001132) - T[239-410] 3.8E-99
Pfam	SMAD_dom_Dwarfin-type (IPR001132) - T[240-410] 3.6E-77
ProSiteProfiles	SMAD_dom_Dwarfin-type (IPR001132) - T[241-434] 73.508