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  1. Transcript 'Moocul.CG.ELv1_2.S79...'
  2. Transcript 'Moocci.CG.ELv1_2.S62...'
  3. Transcript 'Phmamm.CG.MTP2014.S1...'
  4. Transcript 'KH2012:KH.C12.290.v1...'

Transcript Model

Transcript Id

KH2012:KH.C12.290.v1.A.SL2-1

Possible name(s)

PSMC1; PSMC4

Location

KhC12 [3,230,310 / 3,234,863]

Sequences

Amino acid sequence

Length: 425

>KH.C12.290.v1.A.SL2-1
VGLKAAFAKMEELGIATKPAIVTPESSRPGTVQSMLSTTEIDKIEDLYTKYKKLQKQLEF
LGVQEEYIKDEMKNLRKEYLHAQEEVKRIQSIPVVIGQFLEAVDQNNAIVLSTTGSNYYV
RILSTIDRELLKPNSSVALHKHSNALVDVLPPEADSSITMLSADEKPDVSYSDIGGMDIQ
KQEVKEAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTASFIRVVGS
EFVQKYLGEGPRMVRDVFRLAKENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELL
NQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITGKMN
LSDEVDLEDYVARPDKITGADINAICQEAGMLAVRENRYVVLSKDFEKAYKTQMKKDEQE
MEFYK

Nucleotide sequence

Length: 1,470

>KH2012:KH.C12.290.v1.A.SL2-1
AAAGAATTGTGAACATTTTGTTATTATTATAAGTTGGTTTAAAAGCTGCTTTTGCGAAAA
TGGAGGAATTAGGAATAGCAACAAAACCTGCTATCGTCACGCCAGAATCATCCCGTCCTG
GCACTGTTCAATCTATGCTTAGCACGACTGAAATAGACAAGATAGAAGATCTTTATACGA
AATACAAGAAGCTGCAAAAACAACTGGAGTTTCTCGGAGTACAAGAAGAATATATTAAAG
ATGAAATGAAGAACTTGAGGAAGGAATATTTGCATGCTCAGGAAGAAGTGAAACGCATAC
AGAGTATTCCTGTTGTGATTGGTCAATTCTTGGAAGCAGTGGACCAGAACAATGCAATTG
TTCTTTCAACAACCGGATCAAATTATTATGTCCGAATATTAAGCACAATTGATAGAGAAC
TTTTGAAACCGAACTCTTCAGTGGCTCTTCACAAACATAGTAACGCACTTGTGGATGTCC
TCCCTCCTGAAGCAGACAGCAGTATCACTATGCTTTCTGCAGATGAGAAACCTGATGTGT
CTTATTCTGATATTGGTGGAATGGACATCCAGAAACAAGAAGTTAAAGAAGCTGTTGAAC
TTCCGTTGACACATTTCGAGCTTTATAAACAGATTGGAATTGACCCTCCTCGTGGAGTCT
TGATGTTCGGACCTCCTGGTTGTGGAAAGACAATGTTGGCAAAAGCTGTCGCCCACCATA
CCACTGCTTCATTTATTCGAGTCGTTGGATCGGAATTCGTGCAGAAATATCTGGGTGAAG
GACCAAGGATGGTACGGGATGTGTTCAGACTTGCCAAAGAGAACTCCCCTGCCATTATCT
TCATTGATGAAATAGATGCGATCGCCACGAAGCGTTTTGACGCTCAAACTGGTGCAGATC
GTGAGGTGCAACGTATCTTGCTGGAACTACTTAACCAGATGGATGGCTTCGATCAAACTG
TTAATGTTAAGGTTATTATGGCCACCAACCGAGCTGACACGCTCGATCCTGCTCTGCTGC
GTCCTGGTCGTCTGGATCGGAAGATTGAATTCCCGCTTCCGGATCGGAGACAGAAGCGTC
TCGTCTTCTCCACCATTACTGGGAAGATGAACCTCAGCGATGAAGTGGATTTGGAAGATT
ATGTTGCCAGACCTGACAAAATCACTGGTGCTGATATAAATGCAATTTGCCAAGAAGCAG
GCATGCTTGCAGTTCGTGAAAACCGGTATGTCGTTCTTTCCAAAGATTTCGAGAAGGCTT
ACAAAACACAGATGAAGAAAGACGAGCAAGAAATGGAATTTTACAAATGATTGTTTCGTG
ATAAATCGATATTGTTTTCGTGGTGTTACGCTATAAATGGTGATATTACTGTTTTCGAGT
TTCAGTGCAAAGAGCATTTTTGCTGCTATGAAATAAGACTTAGTCATTTTGTCACACAGT
TTGAAGTTCAAATAAATTATCACATTGCAA

InterProScan

PANTHER
PSMC4 (IPR035256) - T[33-425] 2.6E-236
TIGRFAM
26S_Psome_P45-like (IPR005937) - T[52-410] 8.3E-135
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[167-420] 3.21E-66
SMART
AAA+_ATPase (IPR003593) - T[205-344] 5.8E-24
Pfam
ATPase_AAA_core (IPR003959) - T[209-342] 4.5E-43
ProSitePatterns
ATPase_AAA_CS (IPR003960) - T[312-330] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PRS8_HUMAN 46.828 % 319 5.0E-106
PRS4_HUMAN 50.269 % 403 1.14E-138
PRS6B_HUMAN 86.158 % 737 0





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