- Transcript 'KH2012:KH.C12.337.v1...'
Transcript Model
Transcript Id
KH2012:KH.C12.337.v1.A.SL2-1
Possible name(s)
OPRM1; SSTR1; SSTR2
Gene model
Location
KhC12 [2,512,559 / 2,522,806]
Amino acid sequence
Length: 531
>KH.C12.337.v1.A.SL2-1
LIFVPIKNKLTYFKMAADLNNLPNYDWVYGGEAGTDTYIPGKENGQLPIYPGDYPDFPDN
GSLLSPGIGRMNCSGRESFYPDVMESYPSSQIVVPIVYCIMCLIGLIGNGLVMFVIFGSK
EMTKTVANIYVWNLTVADTLLLVSLPFNSTQRLLLNWPFGSGMCKIVETVKYLNYFASVF
FLTAMSIDRYIAVAYVVTSGRWRTSRNTFFVCAAIWMVSLVIVIPLLIHTKIHGGMCALV
FNIQENNDSWDMLPDEEVVYDYGDYYDCNLVTAEDLAMIENLKRRISEEESSGENDNTTM
LMQQIEDKEKKLADDEKLNCKHPDSKTFHAVIIFTFVIGFVIPFIIISACYIMIIVKLQQ
PSGAKTRSRQAERTRRKITRMVVALVIAFFICRLPFYVWHLVLIPGVDVSPGVCHDVRDF
TFCLGFINSCLNPILYTFLGHNFQERLRKSISISLHSFSFTNFTKFTTNTVSRAETAAQS
KKMDTSHIEVEPIVKTTQPLYHPVREEDLILAGEKPATNGANATLLEEREK
Nucleotide sequence
Length: 1,811
>KH2012:KH.C12.337.v1.A.SL2-1
AGAAACTTATATAGTTACCTAGTTAATCTTCGTTCCTATTAAAAACAAACTTACGTATTT
CAAGATGGCGGCCGATTTAAACAACCTGCCAAACTACGACTGGGTTTACGGTGGCGAGGC
GGGAACGGACACCTACATTCCCGGCAAAGAGAACGGCCAACTCCCGATCTATCCGGGCGA
TTACCCAGACTTTCCCGACAATGGTTCTTTATTGTCGCCGGGCATCGGGCGTATGAATTG
CTCAGGTCGTGAAAGTTTCTACCCCGACGTGATGGAGTCGTACCCCTCAAGTCAAATAGT
GGTACCAATTGTTTACTGCATCATGTGTCTAATCGGATTAATCGGCAACGGCCTGGTGAT
GTTTGTTATCTTCGGGAGCAAGGAAATGACAAAAACCGTGGCAAATATTTACGTGTGGAA
TCTTACAGTGGCAGACACCTTGCTGTTGGTTTCACTCCCTTTTAATTCGACCCAAAGGCT
CTTACTGAACTGGCCTTTTGGTTCAGGAATGTGCAAGATCGTGGAAACCGTCAAGTATTT
GAACTACTTCGCCAGCGTATTCTTCTTGACAGCGATGTCCATCGACCGTTACATTGCTGT
GGCATATGTTGTTACTTCAGGGAGGTGGCGAACCAGTCGGAACACTTTCTTTGTATGTGC
TGCGATTTGGATGGTCTCTCTCGTGATAGTGATACCACTGCTTATCCACACAAAGATTCA
TGGAGGAATGTGTGCCCTTGTGTTCAACATTCAAGAGAACAACGATTCTTGGGACATGCT
ACCAGATGAAGAAGTCGTGTATGATTATGGAGATTACTACGACTGTAATCTGGTCACTGC
AGAAGACTTGGCAATGATAGAAAATCTAAAACGAAGAATTAGCGAAGAGGAAAGTTCTGG
AGAAAATGATAACACCACAATGCTGATGCAACAGATTGAAGACAAAGAGAAAAAGCTAGC
AGATGATGAAAAGCTTAATTGCAAACACCCGGATTCAAAGACCTTTCACGCCGTGATCAT
TTTCACGTTTGTGATAGGCTTCGTGATACCTTTCATCATAATATCTGCATGTTATATCAT
GATTATAGTGAAATTGCAGCAACCTTCAGGGGCTAAAACAAGATCAAGACAGGCGGAAAG
AACCCGGCGTAAAATTACCCGCATGGTGGTAGCATTGGTCATTGCTTTCTTTATCTGCCG
CTTACCTTTCTACGTGTGGCATTTGGTTCTAATACCTGGTGTTGACGTCAGCCCCGGTGT
GTGTCATGACGTCAGAGACTTTACGTTCTGCCTGGGATTTATAAACAGCTGCCTTAACCC
GATCCTGTACACCTTCCTTGGTCATAACTTCCAAGAAAGACTTAGAAAGAGCATCTCAAT
ATCGTTGCATTCGTTTTCGTTTACAAACTTTACCAAGTTTACCACCAACACTGTAAGTCG
AGCTGAAACTGCCGCTCAAAGTAAAAAGATGGACACCAGTCACATTGAAGTTGAACCTAT
AGTAAAAACCACACAGCCTCTCTACCACCCGGTCCGAGAGGAAGATCTTATTTTAGCTGG
CGAAAAACCCGCCACCAACGGCGCTAACGCCACGCTTCTCGAGGAGCGAGAGAAATAAAA
CAGCGCAACCAAGCGGTAAGAAATAACAAAACTTTCGCCCGCGAGAGGGAGCAAAAATCA
CATTTTTGTTGCTATGGTAATACGCTGCACTCGCGGTGGATATCTTCACACTGATTGGTT
TTACTAAGAAGACGCAACCCACAAACTCAAGCCATTTCTTCTCTGTGTACATAAACATCA
TATATCACTAT
| PRINTS |
GPCR_Rhodpsn (IPR000276) - T[93-117] 4.5E-49 - T[127-148] 4.5E-49 - T[171-193] 4.5E-49 - T[207-228] 4.5E-49 - T[332-355] 4.5E-49 - T[378-402] 4.5E-49 - T[418-444] 4.5E-49 |
| ProSiteProfiles |
GPCR_Rhodpsn_7TM (IPR017452) - T[108-436] 41.475 |
| Pfam |
GPCR_Rhodpsn (IPR000276) - T[108-232] 2.7E-28 - T[328-436] 6.3E-21 |
| ProSitePatterns |
GPCR_Rhodpsn (IPR000276) - T[177-193] . |
| PRINTS |
Anphylx_rcpt (IPR002234) - T[224-233] 1.7E-5 - T[330-339] 1.7E-5 - T[351-366] 1.7E-5 - T[436-450] 1.7E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SSR2_HUMAN | 36.364 % | 136 | 1.44E-35 |
| SSR1_HUMAN | 36.306 % | 124 | 4.23E-31 |
| OPRM_HUMAN | 38.889 % | 128 | 2.05E-32 |