Aniseed - Transcript Card

Clone 'cima022i12' >
Clone 'cien153276' >
Clone 'cibd006p17' >
EST 'AV858345' >
Transcript 'KH2012:KH.C12.371.v1...'

Transcript Model

Transcript Id

KH2012:KH.C12.371.v1.A.SL3-1

Possible name(s)

CETN1; CETN2; CETN3

Gene model

KH2012:KH.C12.371

Location

KhC12 [4,669,299 / 4,670,096]

Sequences

Amino acid sequence

Length: 170

>KH.C12.371.v1.A.SL3-1
RKTMSLSLRNELGLEKSKRRKRRELTNEQKQEIKEAFELFDTDKDQRIDYHELKVVMRAL
GFEVKKADVLKVLRDYDREGSGTIGFDDYNEVITEWMLERDPQEELGKAFKLFDDDDTGK
ISLRNLRRVARELGETMPEEELRSMIDEFDADGDGEINLEEFIALMTGDT

Nucleotide sequence

Length: 797

>KH2012:KH.C12.371.v1.A.SL3-1
TATTTTAATTTAATCTTTATTACTGTGTGTAGATTTAACGAAAAACCATGAGTTTGTCTC
TGAGAAATGAGCTTGGTTTGGAGAAATCTAAGCGAAGAAAGCGCAGAGAACTCACCAATG
AACAAAAGCAAGAAATTAAAGAAGCTTTTGAACTCTTCGATACAGACAAGGACCAAAGAA
TTGATTATCATGAGTTGAAAGTTGTGATGAGGGCTCTTGGGTTCGAGGTGAAAAAAGCTG
ATGTTTTAAAAGTGCTGAGAGATTACGATCGTGAGGGGTCAGGCACGATAGGTTTCGACG
ATTACAACGAAGTCATCACAGAGTGGATGTTAGAGAGAGATCCTCAAGAAGAATTAGGCA
AAGCATTCAAGCTGTTTGATGATGATGACACTGGTAAAATCTCACTCCGTAATTTGCGAA
GAGTCGCGAGAGAGCTCGGAGAAACCATGCCGGAGGAAGAACTTCGTTCGATGATTGATG
AATTTGATGCTGACGGGGATGGTGAGATTAATCTGGAGGAGTTTATTGCTCTTATGACAG
GGGATACCTAGTCTATGTGTATTCGATGCAACTAACCTGAGAAGTCATCATTTTTCTATC
CTTTAGGTGGCGATAAATCTTTGTATTTTGTTTTTTTGGAAGCAGAAAAAACCTAGCTGA
AAATGTGTATAAATATTATGATGACTTTTAGTCTATCGACGTGTATGTTTATTCTAATGT
TTTGCATGTTCCAAAAAGTAGATATCATCTTACCACAATTGATAACCAAGTCTCCAATTT
TTGATTAAATTAATTGT

InterProScan

SUPERFAMILY	EF-hand-dom_pair (IPR011992) - T[22-168] 1.01E-42
ProSiteProfiles	EF_hand_dom (IPR002048) - T[28-63] 16.187 - T[64-99] 10.859 - T[101-136] 11.975 - T[137-170] 15.211
Pfam	EF_hand_dom (IPR002048) - T[30-92] 3.0E-11 - T[104-166] 1.2E-13
SMART	EF_hand_dom (IPR002048) - T[32-60] 6.1E-8 - T[68-96] 2.6 - T[105-133] 0.25 - T[141-169] 4.1E-7
ProSitePatterns	EF_Hand_1_Ca_BS (IPR018247) - T[41-53] . - T[150-162] .
CDD	EF_hand_dom (IPR002048) - T[105-167] 3.88745E-17

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CETN1_HUMAN	56.579 %	169	1.95E-54
CETN2_HUMAN	56.051 %	169	3.92E-54
CETN3_HUMAN	77.711 %	267	5.13E-93