- Transcript 'Harore.CG.MTP2014.S6...' >
- Transcript 'KH2012:KH.C12.374.v1...'
Transcript Model
Transcript Id
KH2012:KH.C12.374.v1.B.ND2-1
Possible name(s)
CLPX; PSMC3; PSMC5
Gene model
Location
KhC12 [1,452,801 / 1,470,380]
Amino acid sequence
Length: 670
>KH.C12.374.v1.B.ND2-1
QRILYVFTSILKTHETNMAVRCGCSALHSRINRLVSSPPHLHKLIIQDSAAISGRHLSQS
SFSEGRNSRFPNFVDTSSFLSKPTYVFRFANYATDNNNDGGPEDDITDETSPKAPPKDKN
PTVLSSNDKGGSKEGSGGKSSSGLSGGKSGGRKRGAGSNQFTGILCPSCGSPCVKTDTVA
SSRFVRCSNSECSNLFTLDSHPQPQTNPNPTETVWDQKPPPPPRKICEFLDKYVVGQSHA
KKVLSVAVYNHYKRIYKNIPTNKQPNATASQAEGPHMYSSRVPSHGRDESATSTKNDAGK
MKNLEDESSPITLEKSNIVMLGPTGSGKTLLAQTLARCLDVPFAICDCTTLTQAGYVGED
IESVIAKLLQDAGGHVERAEQGIVFLDEVDKISSVPGIHQLRDVGGEGVQQGLLKMLEGT
VVNVPERNSRKLRGDSVVVDTTNILFVASGAFNGLEKFISRRMNEKSLGFSLHSKTSTTK
KDEIFKQTLGFEQQLLKSAIEENKERDELLKHTEASDLVEFGMIPEFVGRLPITVPLHSL
SNEHLTKILTEPRNAVVPQFEALFNMDKSDLAITPSALRAIADLALERKTGARGLRSIME
QLMLDPMYDVPGSDIIGVCIDDDVVRGKKSPHYIRKPAADDNETSYEVAHAPASQITEKT
EPVAVAAVSD
Nucleotide sequence
Length: 2,491
>KH2012:KH.C12.374.v1.B.ND2-1
ACAGAACAAACGTTACGTAAAGTTTATGTTGTCAAGCTGAATATAAGGATACGTTTGTCA
GTCTTAAACTTGTGTTGTAGTCGTGATATTGTTTGTTAATAAATGACAGCGCATTCTATA
TGTTTTTACCTCAATATTAAAAACTCACGAAACCAACATGGCAGTCAGATGTGGATGTTC
TGCTCTGCATTCGCGCATAAACAGACTTGTCTCTTCTCCCCCACATCTTCATAAACTTAT
TATCCAAGATTCTGCCGCAATTTCTGGAAGACATTTATCGCAAAGCTCTTTTTCTGAAGG
CCGGAACTCCAGATTTCCGAATTTTGTTGACACTTCTTCGTTTTTAAGTAAACCCACATA
CGTGTTTCGTTTCGCCAACTATGCAACTGATAATAACAACGACGGGGGCCCTGAGGATGA
TATAACTGACGAAACATCGCCGAAAGCCCCACCGAAAGACAAAAACCCCACAGTTTTATC
CTCAAACGACAAAGGGGGTTCCAAAGAGGGTTCTGGAGGGAAATCCTCTAGTGGGTTAAG
CGGGGGTAAAAGTGGGGGCAGAAAGAGGGGTGCAGGGAGTAATCAGTTCACTGGGATACT
TTGCCCCAGCTGTGGAAGTCCCTGCGTCAAAACTGACACTGTTGCTTCATCAAGATTTGT
CCGATGCTCCAACTCGGAATGCAGCAATTTGTTCACCCTCGACAGTCACCCACAACCCCA
AACAAACCCCAACCCAACTGAAACTGTCTGGGATCAAAAACCACCCCCGCCACCTAGAAA
AATTTGTGAATTCTTGGACAAATACGTTGTGGGCCAAAGTCACGCCAAAAAAGTCCTGTC
AGTTGCTGTGTACAACCATTATAAAAGGATATATAAAAACATACCAACTAATAAACAACC
TAATGCTACAGCAAGCCAAGCAGAAGGACCGCATATGTATTCTTCAAGAGTACCGAGTCA
TGGACGTGACGAGTCAGCAACTTCTACGAAGAATGATGCGGGTAAAATGAAAAACCTGGA
AGATGAGTCGTCCCCGATTACCCTCGAAAAAAGCAACATCGTTATGCTGGGACCTACTGG
TTCAGGTAAGACATTACTGGCACAAACGTTAGCGCGATGTCTTGATGTCCCGTTCGCGAT
ATGCGACTGCACGACGCTTACACAAGCCGGGTACGTGGGGGAGGACATTGAATCAGTGAT
CGCTAAGTTGTTACAAGACGCAGGGGGTCATGTCGAAAGAGCTGAACAGGGGATTGTTTT
TCTTGACGAAGTTGATAAAATAAGCAGCGTGCCGGGAATCCACCAACTACGAGATGTTGG
AGGGGAGGGTGTACAGCAGGGTTTGTTAAAAATGTTGGAGGGGACCGTGGTAAATGTACC
CGAGCGAAACTCTCGTAAATTACGCGGAGATTCAGTTGTCGTGGATACCACGAACATCTT
ATTTGTTGCGTCCGGCGCTTTTAACGGACTCGAAAAATTCATTTCAAGGAGAATGAATGA
AAAATCTCTGGGATTTAGCCTTCATTCTAAAACATCAACAACGAAAAAAGATGAAATTTT
TAAACAGACCTTGGGTTTTGAGCAACAACTTTTAAAATCAGCTATCGAAGAAAACAAAGA
AAGAGATGAATTGTTGAAACATACAGAAGCAAGTGATTTAGTTGAATTTGGAATGATACC
AGAGTTTGTGGGAAGGCTTCCCATCACCGTTCCTCTGCATAGTTTATCAAATGAACATCT
GACTAAAATATTAACGGAACCAAGGAATGCTGTGGTTCCGCAGTTTGAGGCATTGTTTAA
CATGGACAAGTCTGATCTTGCCATCACACCATCTGCATTACGTGCCATCGCTGACTTGGC
TTTGGAACGAAAAACTGGAGCCAGGGGATTGAGGTCTATAATGGAACAACTTATGCTGGA
CCCGATGTATGACGTACCAGGAAGTGACATCATTGGTGTTTGTATCGATGATGACGTAGT
CCGAGGGAAAAAATCGCCGCATTATATACGGAAGCCGGCAGCGGACGACAATGAAACTTC
ATACGAAGTTGCGCACGCCCCCGCTTCGCAAATCACTGAAAAAACTGAACCTGTAGCGGT
AGCGGCAGTTTCGGATTAATTAGTACTGCAATATTAAGATGTTTGTTACTTCTGCCGCCA
GGTGTAATGTGAATTACGTTTTTTTCGGCTTATCTGGTAAAAAAACTTAATTTTTCTCTA
GCGTTTCGACTGGTATTTAAAAAGTCTTTTTTTGGTTATAAAATAAATGTTTTTAAATAC
CAGATATGCCAAAAATACTGTTAAAAATATCACTGCGTTTTTTTTCCTGGTATTTGGGGT
TTTTAGACGGAATTTTCACGTTTTACATAATATTGAATCTAGGTGGAAATTTTCGAGACT
TTTATTGAGAAATATCCGTTTAGATAGGCCCGTGTTGTTTAAGTTTTTGAAAATTTTTCA
TGTTTTTCTGAAACAGGATTCGTTTTTCGTT
| PANTHER |
Clp_protease_ATP-bd_su_ClpX (IPR004487) - T[164-651] 6.9E-182 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[221-254] 1.66E-57 - T[308-473] 1.66E-57 - T[500-625] 1.66E-57 |
| SMART |
AAA+_ATPase (IPR003593) - T[314-468] 3.6E-10 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[314-533] 4.6E-41 |
| Pfam |
Clp_ATPase_C (IPR019489) - T[540-611] 1.5E-12 |
| SMART |
Clp_ATPase_C (IPR019489) - T[540-634] 3.6E-25 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CLPX_HUMAN | 54.947 % | 552 | 0 |