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  1. Transcript 'KH2012:KH.C12.374.v1...'

Transcript Model

Transcript Id

KH2012:KH.C12.374.v1.B.ND2-1

Possible name(s)

CLPX; PSMC3; PSMC5

Location

KhC12 [1,452,801 / 1,470,380]

Sequences

Amino acid sequence

Length: 670

>KH.C12.374.v1.B.ND2-1
QRILYVFTSILKTHETNMAVRCGCSALHSRINRLVSSPPHLHKLIIQDSAAISGRHLSQS
SFSEGRNSRFPNFVDTSSFLSKPTYVFRFANYATDNNNDGGPEDDITDETSPKAPPKDKN
PTVLSSNDKGGSKEGSGGKSSSGLSGGKSGGRKRGAGSNQFTGILCPSCGSPCVKTDTVA
SSRFVRCSNSECSNLFTLDSHPQPQTNPNPTETVWDQKPPPPPRKICEFLDKYVVGQSHA
KKVLSVAVYNHYKRIYKNIPTNKQPNATASQAEGPHMYSSRVPSHGRDESATSTKNDAGK
MKNLEDESSPITLEKSNIVMLGPTGSGKTLLAQTLARCLDVPFAICDCTTLTQAGYVGED
IESVIAKLLQDAGGHVERAEQGIVFLDEVDKISSVPGIHQLRDVGGEGVQQGLLKMLEGT
VVNVPERNSRKLRGDSVVVDTTNILFVASGAFNGLEKFISRRMNEKSLGFSLHSKTSTTK
KDEIFKQTLGFEQQLLKSAIEENKERDELLKHTEASDLVEFGMIPEFVGRLPITVPLHSL
SNEHLTKILTEPRNAVVPQFEALFNMDKSDLAITPSALRAIADLALERKTGARGLRSIME
QLMLDPMYDVPGSDIIGVCIDDDVVRGKKSPHYIRKPAADDNETSYEVAHAPASQITEKT
EPVAVAAVSD

Nucleotide sequence

Length: 2,491

>KH2012:KH.C12.374.v1.B.ND2-1
ACAGAACAAACGTTACGTAAAGTTTATGTTGTCAAGCTGAATATAAGGATACGTTTGTCA
GTCTTAAACTTGTGTTGTAGTCGTGATATTGTTTGTTAATAAATGACAGCGCATTCTATA
TGTTTTTACCTCAATATTAAAAACTCACGAAACCAACATGGCAGTCAGATGTGGATGTTC
TGCTCTGCATTCGCGCATAAACAGACTTGTCTCTTCTCCCCCACATCTTCATAAACTTAT
TATCCAAGATTCTGCCGCAATTTCTGGAAGACATTTATCGCAAAGCTCTTTTTCTGAAGG
CCGGAACTCCAGATTTCCGAATTTTGTTGACACTTCTTCGTTTTTAAGTAAACCCACATA
CGTGTTTCGTTTCGCCAACTATGCAACTGATAATAACAACGACGGGGGCCCTGAGGATGA
TATAACTGACGAAACATCGCCGAAAGCCCCACCGAAAGACAAAAACCCCACAGTTTTATC
CTCAAACGACAAAGGGGGTTCCAAAGAGGGTTCTGGAGGGAAATCCTCTAGTGGGTTAAG
CGGGGGTAAAAGTGGGGGCAGAAAGAGGGGTGCAGGGAGTAATCAGTTCACTGGGATACT
TTGCCCCAGCTGTGGAAGTCCCTGCGTCAAAACTGACACTGTTGCTTCATCAAGATTTGT
CCGATGCTCCAACTCGGAATGCAGCAATTTGTTCACCCTCGACAGTCACCCACAACCCCA
AACAAACCCCAACCCAACTGAAACTGTCTGGGATCAAAAACCACCCCCGCCACCTAGAAA
AATTTGTGAATTCTTGGACAAATACGTTGTGGGCCAAAGTCACGCCAAAAAAGTCCTGTC
AGTTGCTGTGTACAACCATTATAAAAGGATATATAAAAACATACCAACTAATAAACAACC
TAATGCTACAGCAAGCCAAGCAGAAGGACCGCATATGTATTCTTCAAGAGTACCGAGTCA
TGGACGTGACGAGTCAGCAACTTCTACGAAGAATGATGCGGGTAAAATGAAAAACCTGGA
AGATGAGTCGTCCCCGATTACCCTCGAAAAAAGCAACATCGTTATGCTGGGACCTACTGG
TTCAGGTAAGACATTACTGGCACAAACGTTAGCGCGATGTCTTGATGTCCCGTTCGCGAT
ATGCGACTGCACGACGCTTACACAAGCCGGGTACGTGGGGGAGGACATTGAATCAGTGAT
CGCTAAGTTGTTACAAGACGCAGGGGGTCATGTCGAAAGAGCTGAACAGGGGATTGTTTT
TCTTGACGAAGTTGATAAAATAAGCAGCGTGCCGGGAATCCACCAACTACGAGATGTTGG
AGGGGAGGGTGTACAGCAGGGTTTGTTAAAAATGTTGGAGGGGACCGTGGTAAATGTACC
CGAGCGAAACTCTCGTAAATTACGCGGAGATTCAGTTGTCGTGGATACCACGAACATCTT
ATTTGTTGCGTCCGGCGCTTTTAACGGACTCGAAAAATTCATTTCAAGGAGAATGAATGA
AAAATCTCTGGGATTTAGCCTTCATTCTAAAACATCAACAACGAAAAAAGATGAAATTTT
TAAACAGACCTTGGGTTTTGAGCAACAACTTTTAAAATCAGCTATCGAAGAAAACAAAGA
AAGAGATGAATTGTTGAAACATACAGAAGCAAGTGATTTAGTTGAATTTGGAATGATACC
AGAGTTTGTGGGAAGGCTTCCCATCACCGTTCCTCTGCATAGTTTATCAAATGAACATCT
GACTAAAATATTAACGGAACCAAGGAATGCTGTGGTTCCGCAGTTTGAGGCATTGTTTAA
CATGGACAAGTCTGATCTTGCCATCACACCATCTGCATTACGTGCCATCGCTGACTTGGC
TTTGGAACGAAAAACTGGAGCCAGGGGATTGAGGTCTATAATGGAACAACTTATGCTGGA
CCCGATGTATGACGTACCAGGAAGTGACATCATTGGTGTTTGTATCGATGATGACGTAGT
CCGAGGGAAAAAATCGCCGCATTATATACGGAAGCCGGCAGCGGACGACAATGAAACTTC
ATACGAAGTTGCGCACGCCCCCGCTTCGCAAATCACTGAAAAAACTGAACCTGTAGCGGT
AGCGGCAGTTTCGGATTAATTAGTACTGCAATATTAAGATGTTTGTTACTTCTGCCGCCA
GGTGTAATGTGAATTACGTTTTTTTCGGCTTATCTGGTAAAAAAACTTAATTTTTCTCTA
GCGTTTCGACTGGTATTTAAAAAGTCTTTTTTTGGTTATAAAATAAATGTTTTTAAATAC
CAGATATGCCAAAAATACTGTTAAAAATATCACTGCGTTTTTTTTCCTGGTATTTGGGGT
TTTTAGACGGAATTTTCACGTTTTACATAATATTGAATCTAGGTGGAAATTTTCGAGACT
TTTATTGAGAAATATCCGTTTAGATAGGCCCGTGTTGTTTAAGTTTTTGAAAATTTTTCA
TGTTTTTCTGAAACAGGATTCGTTTTTCGTT

InterProScan

PANTHER
Clp_protease_ATP-bd_su_ClpX (IPR004487) - T[164-651] 6.9E-182
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[221-254] 1.66E-57 - T[308-473] 1.66E-57 - T[500-625] 1.66E-57
SMART
AAA+_ATPase (IPR003593) - T[314-468] 3.6E-10
Pfam
ATPase_AAA_core (IPR003959) - T[314-533] 4.6E-41
Pfam
Clp_ATPase_C (IPR019489) - T[540-611] 1.5E-12
SMART
Clp_ATPase_C (IPR019489) - T[540-634] 3.6E-25

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CLPX_HUMAN 54.947 % 552 0





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