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  1. Transcript 'KH2012:KH.C12.396.v1...'

Transcript Model

Transcript Id

KH2012:KH.C12.396.v1.A.nonSL4-1

Possible name(s)

CALM1; CALM3; EFHD1

Location

KhC12 [1,084,921 / 1,085,605]

Sequences

Amino acid sequence

Length: 153

>KH.C12.396.v1.A.nonSL4-1
IDLLHRTYCADIFSQRKNINQKRKMLTDVSDEDYAKRFPQWEAEDIGDYKVQFEIFDLNR
DGLIDFKEMNMVLDEFGESSDEQDRIKYFRQIDLDDSNSVDFEEFLLVLNKLQQAAGLNK
AAGNIGNIVTQGAHQVKELRRMSVYKQLTNGLF

Nucleotide sequence

Length: 684

>KH2012:KH.C12.396.v1.A.nonSL4-1
GATTGACTTGCTGCACCGAACATACTGCGCTGATATTTTCTCCCAGCGTAAAAACATCAA
TCAAAAACGGAAGATGTTAACGGATGTAAGTGATGAAGATTACGCTAAGCGCTTCCCGCA
ATGGGAGGCGGAAGACATAGGCGACTACAAGGTCCAATTTGAGATTTTTGACTTAAACCG
AGATGGTTTAATCGACTTCAAAGAAATGAATATGGTGCTTGATGAATTCGGGGAAAGCAG
CGACGAACAGGACCGAATAAAATACTTCAGGCAGATTGATCTTGACGATTCTAATAGCGT
TGACTTTGAAGAGTTTCTGCTTGTGCTGAATAAACTGCAACAGGCGGCTGGGCTAAACAA
AGCAGCCGGCAACATCGGTAATATTGTAACACAAGGTGCTCATCAAGTTAAAGAATTAAG
GAGGATGTCCGTTTACAAGCAACTGACAAACGGCTTGTTTTAAATAAAACCGAAGGTCAT
TTTGTTGGAATTTGTTTGTTTATTGTTTTGTTGATCAGTTTTATTTTTTAATAACTCTAA
AATAAAAGACCAAAACACTATAAAACGGCAAATCAGCGCGCCTGCCTCTAGCACAGAGTG
CCGATTCCGCTACCATTTGGCGCATAGGTGTTCTTTTAGCAGAAAAAATAGGGAAATTGC
TTTAACCCAGTGGTCACCAGTGGG

InterProScan

SUPERFAMILY
EF-hand-dom_pair (IPR011992) - T[43-111] 2.96E-14
ProSiteProfiles
EF_hand_dom (IPR002048) - T[44-79] 12.198 - T[80-115] 10.72
SMART
EF_hand_dom (IPR002048) - T[48-76] 0.94 - T[84-112] 7.5
CDD
EF_hand_dom (IPR002048) - T[48-106] 4.07404E-11
Pfam
EF_hand_dom (IPR002048) - T[53-72] 1.5E-4 - T[87-106] 0.0013
ProSitePatterns
EF_Hand_1_Ca_BS (IPR018247) - T[57-69] . - T[93-105] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value





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